RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PTPRSQ13332 1948 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 ZNF469Q96JG9 3925 aaPredicted RBP0.75□□□□□ -2.29
CCDC7-209ENST00000539197 INTS1Q8N201 2190 aaKnown RBP0.75□□□□□ -2.29
CCDC7-209ENST00000539197 IGKV2D-26A0A0A0MRZ7 120 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 C7orf71A4D174 169 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 M0R378 163 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 TAX1BP3O14907 124 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 HCRTO43612 131 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 SULT1B1O43704 296 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 OR1I1O60431 355 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 LYZL6O75951 148 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 GADD45GO95257 159 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 BAALC-AS2P0C853 105 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 G0S2P27469 103 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 BRS3P32247 399 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 RAB4BP61018 213 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 PLCXD2Q0VAA5 305 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 PDE6HQ13956 83 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 SOSTDC1Q6X4U4 206 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 Q8IYB0 196 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 TRABDQ9H4I3 376 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 MED9Q9NWA0 146 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 STOML2Q9UJZ1 356 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 PRNDQ9UKY0 176 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 SLC35A3Q9Y2D2 325 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 FBN2P35556 2912 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 GREB1Q4ZG55 1949 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 ROS1P08922 2347 aa0.75□□□□□ -2.29
CCDC7-209ENST00000539197 TRAV12-1A0A0B4J245 112 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 TMEM238C9JI98 176 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 ATG12O94817 140 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 IFNA7P01567 189 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 PRB4P10163 310 aaPredicted RBP0.74□□□□□ -2.29
CCDC7-209ENST00000539197 ZNF93P35789 620 aaPredicted RBP0.74□□□□□ -2.29
CCDC7-209ENST00000539197 CNBPP62633 177 aaKnown RBP0.74□□□□□ -2.29
CCDC7-209ENST00000539197 RHOGP84095 191 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 RPL19P84098 196 aaKnown RBP0.74□□□□□ -2.29
CCDC7-209ENST00000539197 PDZD9Q8IXQ8 264 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 C12orf29Q8N999 325 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 SLC30A7Q8NEW0 376 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 OR2T10Q8NGZ9 312 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 ZNF418Q8TF45 676 aaPredicted RBP0.74□□□□□ -2.29
CCDC7-209ENST00000539197 SFT2D1Q8WV19 159 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 IMUPQ9GZP8 106 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 C6orf62Q9GZU0 229 aaPredicted RBP0.74□□□□□ -2.29
CCDC7-209ENST00000539197 TMEM126AQ9H061 195 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 NHP2Q9NX24 153 aaKnown RBP0.74□□□□□ -2.29
CCDC7-209ENST00000539197 PYCARDQ9ULZ3 195 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 MED1Q15648 1581 aaPredicted RBP0.74□□□□□ -2.29
CCDC7-209ENST00000539197 PTPRBP23467 1997 aa0.74□□□□□ -2.29
CCDC7-209ENST00000539197 FMN1Q68DA7 1419 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 MIA2Q96PC5 1412 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 G3V2T6 193 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 TMEM256-PLSCR3K7ERE1 68 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 NDUFB3O43676 98 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 TIMM17BO60830 172 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 BANF1O75531 89 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 PIAS1O75925 651 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 NDUFC2O95298 119 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 IFNA1P01562 189 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 GNG10P50151 68 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 SNCBQ16143 134 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 BCL2L15Q5TBC7 163 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 C22orf39Q6P5X5 142 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 TMED4Q7Z7H5 227 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 LYG2Q86SG7 212 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 CLECL1Q8IZS7 167 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 SMIM20Q8N5G0 67 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 LINC00301Q8NCQ3 95 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 OR4C6Q8NH72 309 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 HOPXQ9BPY8 73 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-209ENST00000539197 PAIP2Q9BPZ3 127 aaKnown RBP0.73□□□□□ -2.29
CCDC7-209ENST00000539197 GID8Q9NWU2 228 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 PCTPQ9UKL6 214 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 HS3ST2Q9Y278 367 aa0.73□□□□□ -2.29
CCDC7-209ENST00000539197 DOCK5Q9H7D0 1870 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 TRGV10A0A0A0MS01 117 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 TRBV6-8A0A0A6YYG3 113 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 DUXBA0A1W2PPF3 345 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 B4DSR2 109 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 H7C1C5 153 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 MFSD11O43934 449 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 PROSCO94903 275 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 NFYBP25208 207 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 PHBP35232 272 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 INSL3P51460 131 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 TAS2R41P59536 307 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 LCN6P62502 163 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 GNG3P63215 75 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 C1orf137Q5JT78 98 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 AKR1C8PQ5T2L2 129 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 OR2T35Q8NGX2 323 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 GINS3Q9BRX5 216 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 ACER3Q9NUN7 267 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 SSR3Q9UNL2 185 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 UFC1Q9Y3C8 167 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 SNURFQ9Y675 71 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 HEATR5AQ86XA9 2040 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 PCDH15Q96QU1 1955 aa0.72□□□□□ -2.29
CCDC7-209ENST00000539197 KIF13BQ9NQT8 1826 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms