RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 KLK15Q9H2R5 256 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 MXRA5Q9NR99 2828 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 ELOA3CA0A087WX78 387 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-207ENST00000539047 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.97□□□□□ -0.49
VAMP1-207ENST00000539047 A0A1B0GUS0 222 aa11.97□□□□□ -0.49
VAMP1-207ENST00000539047 CLEC3BP05452 202 aa11.97□□□□□ -0.49
VAMP1-207ENST00000539047 OR5G3P0C626 314 aa11.97□□□□□ -0.49
VAMP1-207ENST00000539047 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-207ENST00000539047 LYZP61626 148 aa11.97□□□□□ -0.49
VAMP1-207ENST00000539047 C10orf113Q5VZT2 155 aa11.97□□□□□ -0.49
VAMP1-207ENST00000539047 RNF152Q8N8N0 203 aa11.97□□□□□ -0.49
VAMP1-207ENST00000539047 GATAD1Q8WUU5 269 aa11.97□□□□□ -0.49
VAMP1-207ENST00000539047 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
VAMP1-207ENST00000539047 RNF24Q9Y225 148 aa11.97□□□□□ -0.49
VAMP1-207ENST00000539047 RFNGQ9Y644 331 aa11.97□□□□□ -0.49
VAMP1-207ENST00000539047 CTXND1A0A1B0GTU2 59 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 BMPR1BO00238 502 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 HYPMO75409 117 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 IGKV1-17P01599 117 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 IGHV3-11P01762 117 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 RPLP1P05386 114 aaKnown RBP11.96□□□□□ -0.49
VAMP1-207ENST00000539047 H2AFB1P0C5Y9 115 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 PSG1P11464 419 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 TAS2R45P59539 299 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 ZNF343Q6P1L6 599 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 OR1B1Q8NGR6 318 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 LINC01006Q8NI28 216 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 UBE2E2Q96LR5 201 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 PBDC1Q9BVG4 233 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 SLC25A22Q9H936 323 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 RPRMQ9NS64 109 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 PFDN2Q9UHV9 154 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 RNF114Q9Y508 228 aa11.96□□□□□ -0.49
VAMP1-207ENST00000539047 ANK3Q12955 4377 aaKnown RBP11.95□□□□□ -0.5
VAMP1-207ENST00000539047 ATRQ13535 2644 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 CLPSL1A2RUU4 121 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 ANKRD34BA5PLL1 514 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 F8W735 103 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-207ENST00000539047 YIF1AO95070 293 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 IL4P05112 153 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 CTSGP08311 255 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 NMBP08949 121 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 LGALS1P09382 135 aaKnown RBP11.95□□□□□ -0.5
VAMP1-207ENST00000539047 ORM2P19652 201 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 GATA2P23769 480 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-207ENST00000539047 NDUFA5Q16718 116 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 LCNL1Q6ZST4 164 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 ZNF491Q8N8L2 437 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 RNF125Q96EQ8 232 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 RCC1LQ96I51 464 aaKnown RBP11.95□□□□□ -0.5
VAMP1-207ENST00000539047 VSIRQ9H7M9 311 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 DNAJC4Q9NNZ3 241 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 DOK5Q9P104 306 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 PEF1Q9UBV8 284 aaKnown RBP11.95□□□□□ -0.5
VAMP1-207ENST00000539047 HIGD1AQ9Y241 93 aa11.95□□□□□ -0.5
VAMP1-207ENST00000539047 COL6A5A8TX70 2615 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 FBN1P35555 2871 aaKnown RBP11.94□□□□□ -0.5
VAMP1-207ENST00000539047 MAP1LC3B2A6NCE7 125 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 NUDT19A8MXV4 375 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 GGCTO75223 188 aaKnown RBP11.94□□□□□ -0.5
VAMP1-207ENST00000539047 OR2C1O95371 312 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 PLP1P60201 277 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 FAM78BQ5VT40 261 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 C10orf99Q6UWK7 81 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 PRIMA1Q86XR5 153 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 MYOZ3Q8TDC0 251 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 SFT2D1Q8WV19 159 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 NARS2Q96I59 477 aaKnown RBP11.94□□□□□ -0.5
VAMP1-207ENST00000539047 MAP1LC3BQ9GZQ8 125 aa11.94□□□□□ -0.5
VAMP1-207ENST00000539047 PUS1Q9Y606 427 aaKnown RBP eCLIP11.94□□□□□ -0.5
VAMP1-207ENST00000539047 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 PPP5D1E7EU14 171 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 FHITP49789 147 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 KHDC3LQ587J8 217 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 IQCF2Q8IXL9 164 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 PCNPQ8WW12 178 aaKnown RBP11.93□□□□□ -0.5
VAMP1-207ENST00000539047 WFDC12Q8WWY7 111 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 HRH4Q9H3N8 390 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 TECRQ9NZ01 308 aaKnown RBP11.93□□□□□ -0.5
VAMP1-207ENST00000539047 RABAC1Q9UI14 185 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 FUT9Q9Y231 359 aa11.93□□□□□ -0.5
VAMP1-207ENST00000539047 IFNA1P01562 189 aa11.92□□□□□ -0.5
VAMP1-207ENST00000539047 ADMP35318 185 aa11.92□□□□□ -0.5
VAMP1-207ENST00000539047 CDX1P47902 265 aaPredicted RBP11.92□□□□□ -0.5
VAMP1-207ENST00000539047 FOXL1Q12952 345 aa11.92□□□□□ -0.5
VAMP1-207ENST00000539047 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
VAMP1-207ENST00000539047 LCN15Q6UWW0 184 aa11.92□□□□□ -0.5
VAMP1-207ENST00000539047 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
VAMP1-207ENST00000539047 C4orf3Q8WVX3 66 aa11.92□□□□□ -0.5
VAMP1-207ENST00000539047 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
VAMP1-207ENST00000539047 PLA2G2EQ9NZK7 142 aa11.92□□□□□ -0.5
VAMP1-207ENST00000539047 WI2-2373I1.2A0A1W2PRP0 233 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 NDUFA4O00483 81 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 CXorf1O96002 111 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 ZP3P21754 424 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 PPT1P50897 306 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 RPEL1Q2QD12 228 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms