RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 OCC1Q8TAD7 63 aa11.65□□□□□ -0.54
ATL3-203ENST00000538786 FAM210BQ96KR6 192 aa11.65□□□□□ -0.54
ATL3-203ENST00000538786 OR5B12Q96R08 314 aa11.65□□□□□ -0.54
ATL3-203ENST00000538786 MEGF9Q9H1U4 602 aa11.65□□□□□ -0.54
ATL3-203ENST00000538786 C7orf69Q9H7B7 122 aa11.65□□□□□ -0.54
ATL3-203ENST00000538786 BIN3Q9NQY0 253 aa11.65□□□□□ -0.54
ATL3-203ENST00000538786 AURKAIP1Q9NWT8 199 aaPredicted RBP11.65□□□□□ -0.54
ATL3-203ENST00000538786 ZMAT5Q9UDW3 170 aaKnown RBP11.65□□□□□ -0.54
ATL3-203ENST00000538786 UBR5O95071 2799 aaPredicted RBP11.65□□□□□ -0.54
ATL3-203ENST00000538786 HELTA6NFD8 242 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 PPP1R2P9O14990 202 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 TOMM40O96008 361 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 S100PP25815 95 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 GALR1P47211 349 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 YPEL3P61236 119 aaPredicted RBP11.64□□□□□ -0.55
ATL3-203ENST00000538786 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
ATL3-203ENST00000538786 A0A0U1RQK1 487 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 GNG7O60262 68 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 IGHV4-38-2P0DP08 117 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 GP9P14770 177 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 HIST1H1BP16401 226 aaKnown RBP11.64□□□□□ -0.55
ATL3-203ENST00000538786 C5orf56Q8N8D9 126 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 FAM110DQ8TAY7 271 aaPredicted RBP11.64□□□□□ -0.55
ATL3-203ENST00000538786 SFRP2Q96HF1 295 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 TCEAL7Q9BRU2 100 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 ELOVL1Q9BW60 279 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 C21orf62Q9NYP8 219 aa11.64□□□□□ -0.55
ATL3-203ENST00000538786 MED13LQ71F56 2210 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 TRAV20A0A0B4J274 112 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 NDUFB8O95169 186 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 GATA3P23771 443 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 KLK9Q2XQG4 91 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 ZNF329Q86UD4 541 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 PIFOQ8TCI5 191 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 TMEM68Q96MH6 324 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 PYGO2Q9BRQ0 406 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 TMUB1Q9BVT8 246 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 SLC25A39Q9BZJ4 359 aaPredicted RBP11.63□□□□□ -0.55
ATL3-203ENST00000538786 HIF1ANQ9NWT6 349 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 KLK9Q9UKQ9 250 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 WNK2Q9Y3S1 2297 aa11.63□□□□□ -0.55
ATL3-203ENST00000538786 MDFIC2A0A1B0GVS7 189 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 F8W735 103 aaPredicted RBP11.62□□□□□ -0.55
ATL3-203ENST00000538786 TGOLN2O43493 480 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 OR2J3O76001 311 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 SRP14P37108 136 aaKnown RBP11.62□□□□□ -0.55
ATL3-203ENST00000538786 MYCNOSP40205 109 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 GNG4P50150 75 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 UNQ5815/PRO19632Q6UWF5 114 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 NECAP1Q8NC96 275 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 SAV1Q9H4B6 383 aaPredicted RBP11.62□□□□□ -0.55
ATL3-203ENST00000538786 MOB4Q9Y3A3 225 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 S4R3C0 116 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 LRRK2Q5S007 2527 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 NBEAP1P0C6P0 100 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 ECSCRQ19T08 205 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 Q56UQ5 140 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 CENPWQ5EE01 88 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 LEMD1Q68G75 181 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 RNF125Q96EQ8 232 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 TMEM14CQ9P0S9 112 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 FBXL7Q9UJT9 491 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
ATL3-203ENST00000538786 A0A096LNT2 108 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 WI2-2373I1.2A0A1W2PRP0 233 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 K7EN84 100 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 SCGB2A1O75556 95 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 TEX38Q6PEX7 206 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 KCNIP4Q6PIL6 250 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 TMEM219Q86XT9 240 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 VN1R17PQ8TDU5 208 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 IMMP2LQ96T52 175 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 TXN2Q99757 166 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 SHANK2-AS3Q9BTD1 123 aa11.61□□□□□ -0.55
ATL3-203ENST00000538786 IL4P05112 153 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 S100A6P06703 90 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 HNF1AP20823 631 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 FCGR2BP31994 310 aaPredicted RBP11.6□□□□□ -0.55
ATL3-203ENST00000538786 RANP62826 216 aaKnown RBP11.6□□□□□ -0.55
ATL3-203ENST00000538786 BLNKQ8WV28 456 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 H3BRN7 92 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 GGCTO75223 188 aaKnown RBP11.6□□□□□ -0.55
ATL3-203ENST00000538786 TAS2R60P59551 318 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 ZNF600Q6ZNG1 722 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 S100A7AQ86SG5 101 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 LINC01356Q8N9X3 169 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 OR10G8Q8NGN5 311 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 CDC42EP3Q9UKI2 254 aa11.6□□□□□ -0.55
ATL3-203ENST00000538786 SH2D7A6NKC9 451 aaPredicted RBP11.59□□□□□ -0.55
ATL3-203ENST00000538786 LINC01548A6NM66 108 aa11.59□□□□□ -0.55
ATL3-203ENST00000538786 PEX7O00628 323 aa11.59□□□□□ -0.55
ATL3-203ENST00000538786 AMY1AP04745 511 aa11.59□□□□□ -0.55
ATL3-203ENST00000538786 SNRPCP09234 159 aaKnown RBP11.59□□□□□ -0.55
ATL3-203ENST00000538786 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
ATL3-203ENST00000538786 IGF2BP2-AS1Q96M15 143 aa11.59□□□□□ -0.55
ATL3-203ENST00000538786 ASH1LQ9NR48 2969 aaKnown RBP11.59□□□□□ -0.55
ATL3-203ENST00000538786 TRBV9A0A0B4J1U6 114 aa11.58□□□□□ -0.55
ATL3-203ENST00000538786 C5orf52A6NGY3 159 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms