RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 LOXL2Q9Y4K0 774 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 U3KQA8 63 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 CACNA1DQ01668 2161 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 TRAV26-1A0A087WT03 109 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 LOC102724200A0A096LPH7 203 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-209ENST00000538654 FAM231BA6NCW3 169 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 SMIM17P0DL12 118 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 PRCDQ00LT1 54 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 POU2AF1Q16633 256 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 C2orf83Q53S99 150 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 RPL39P5Q59GN2 51 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 LYSMD4Q5XG99 296 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 SPEM1Q8N4L4 309 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 TPRX1Q8N7U7 411 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 OR5A1Q8NGJ0 315 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 FAM167A-AS1Q96KT0 104 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 SLC25A2Q9BXI2 301 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 TP73-AS1Q9UF72 201 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 REV3LO60673 3130 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 IGHV3-64DA0A0J9YX35 117 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 K7EP34 96 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 RS1O15537 224 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 UQCRFS1P47985 274 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 CR1LQ2VPA4 569 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 C11orf53Q8IXP5 236 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 OR1L8Q8NGR8 309 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 SARAFQ96BY9 339 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 PAXXQ9BUH6 204 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 IFI27L2Q9H2X8 130 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 R4GN57 208 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 TRBV7-9A0A0J9YWB2 115 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 SCGB1A1P11684 91 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 EDDM3AQ14507 147 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 WDR82Q6UXN9 313 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 ZNF826PQ6ZT77 177 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 LINC00173Q6ZV60 143 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 ASCL5Q7RTU5 278 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 LINC00479Q96M42 142 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 C7orf69Q9H7B7 122 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 CDH23Q9H251 3354 aa7.32□□□□□ -1.24
SNHG1-209ENST00000538654 IGKV1OR2-108A0A075B7D4 117 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 CHEK1O14757 476 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 COX7A2P2O60397 106 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 RAB9AP51151 201 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 ZNF134P52741 427 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 FOXA3P55318 350 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-209ENST00000538654 Q0VFX4 171 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 C2orf91Q6ZV80 131 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 NEGR1Q7Z3B1 354 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 PPP1R32Q7Z5V6 425 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 C5orf17Q8NAS9 161 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 OR1N2Q8NGR9 330 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 ZNF492Q9P255 531 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 PPIAL4DF5H284 164 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 MGST3O14880 152 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 GPR82Q96P67 336 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 FNDC4Q9H6D8 234 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-209ENST00000538654 PSMB11A5LHX3 300 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 P01737 135 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 COL8A2P25067 703 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 CSN1S1P47710 185 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 LOXL3P58215 753 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 C10orf113Q5VZT2 155 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 OR2K2Q8NGT1 345 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 KLF14Q8TD94 323 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-209ENST00000538654 DCTN5Q9BTE1 182 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 PRSS22Q9GZN4 317 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 JKAMPQ9P055 326 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 KLF12Q9Y4X4 402 aa7.31□□□□□ -1.24
SNHG1-209ENST00000538654 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.3□□□□□ -1.24
SNHG1-209ENST00000538654 VWC2LB2RUY7 222 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 NBR2O15453 112 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 SAMD13Q5VXD3 122 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 ZNF562Q6V9R5 426 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 OR10AG1Q8NH19 301 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 OR9G1Q8NH87 305 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 LRRC29Q8WV35 223 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 EPDR1Q9UM22 224 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 SZT2Q5T011 3432 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 UPK2O00526 184 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 CRYBA4P53673 196 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 HSD52Q0P140 79 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 SPINK14Q6IE38 97 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 PDPNQ86YL7 162 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 CD177Q8N6Q3 437 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 VSTM2AQ8TAG5 236 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 MRPL53Q96EL3 112 aaKnown RBP7.3□□□□□ -1.24
SNHG1-209ENST00000538654 FMC1Q96HJ9 113 aa7.3□□□□□ -1.24
SNHG1-209ENST00000538654 TRAV5A0A0B4J249 113 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 A0A0G2JLM5 398 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 FAM87AP0C7U9 286 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 MPV17P39210 176 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 RPL11P62913 178 aaKnown RBP7.29□□□□□ -1.24
SNHG1-209ENST00000538654 OR4X2Q8NGF9 303 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 PGLYRP4Q96LB8 373 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 TFF1P04155 84 aa7.29□□□□□ -1.24
SNHG1-209ENST00000538654 SLC25A5P05141 298 aaKnown RBP7.29□□□□□ -1.24
SNHG1-209ENST00000538654 RNASE2P10153 161 aaKnown RBP7.29□□□□□ -1.24
SNHG1-209ENST00000538654 CCL4P13236 92 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms