RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 FAM122CQ6P4D5 195 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 ZNF600Q6ZNG1 722 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 STPG3Q8N7X2 389 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 THAP8Q8NA92 274 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 KLHL30-AS1Q8NEE0 82 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 ZNF680Q8NEM1 530 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 OR51G1Q8NGK1 321 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 OR10G4Q8NGN3 311 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 OR10G9Q8NGN4 311 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 OR10G7Q8NGN6 311 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 OR1B1Q8NGR6 318 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 FAM213BQ8TBF2 198 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 LRRC20Q8TCA0 184 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 NARS2Q96I59 477 aaKnown RBP8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 UBE2E2Q96LR5 201 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 C20orf24Q9BUV8 137 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 GGTLC1Q9BX51 225 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 ACTR3CQ9C0K3 210 aaPredicted RBP8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 SLC39A9Q9NUM3 307 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 MRPL36Q9P0J6 103 aaKnown RBP8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 DOK5Q9P104 306 aa8.29□□□□□ -1.08
TNFRSF1A-211ENST00000538363 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 IGHV3-35A0A0C4DH35 117 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 PPP5D1E7EU14 171 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 TGOLN2O43493 480 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 GGCTO75223 188 aaKnown RBP8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 GATA2P23769 480 aaPredicted RBP8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 YPEL3P61236 119 aaPredicted RBP8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 BLOC1S1P78537 153 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 RPEL1Q2QD12 228 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 TMEM41BQ5BJD5 291 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 C10orf113Q5VZT2 155 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 IQCF2Q8IXL9 164 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 ZNF491Q8N8L2 437 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 PFDN5Q99471 154 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 RNF2Q99496 336 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 ARV1Q9H2C2 271 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 SLC45A2Q9UMX9 530 aa8.28□□□□□ -1.08
TNFRSF1A-211ENST00000538363 BMPR1BO00238 502 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 OR2C1O95371 312 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 TOMM40O96008 361 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IL4P05112 153 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 LGALS1P09382 135 aaKnown RBP8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IGLC1P0CG04 106 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CD28P10747 220 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 PSG1P11464 419 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 M6PRP20645 277 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 RHOBP62745 196 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 FAM74A1Q5RGS3 127 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 PXDC1Q5TGL8 231 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 ZNF343Q6P1L6 599 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 ATP6V0BQ99437 205 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 DNAJC4Q9NNZ3 241 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 RNF24Q9Y225 148 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 HIGD1AQ9Y241 93 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 LSM4Q9Y4Z0 139 aaKnown RBP8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 TSSC4Q9Y5U2 329 aaPredicted RBP8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 PUS1Q9Y606 427 aaKnown RBP eCLIP8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 RFNGQ9Y644 331 aa8.27□□□□□ -1.09
TNFRSF1A-211ENST00000538363 ELOA3CA0A087WX78 387 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 HSPB1P04792 205 aaKnown RBP8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CTSGP08311 255 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 H2AFB1P0C5Y9 115 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 ZP3P21754 424 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 FCGR2BP31994 310 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CDX1P47902 265 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CDC34P49427 236 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 SULT1A2P50226 295 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 KLK9Q2XQG4 91 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 NSUN5P1Q3KNT7 163 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 DPPA3Q6W0C5 159 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 OR1N2Q8NGR9 330 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 GATAD1Q8WUU5 269 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CHRDL1Q9BU40 450 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 C19orf24Q9BVV8 132 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 RABAC1Q9UI14 185 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 KLK9Q9UKQ9 250 aa8.26□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IGKV1D-37A0A075B6S9 117 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IGKV1OR2-108A0A075B7D4 117 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 A0A1B0GV50 99 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 NPPCP23582 126 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 BMI1P35226 326 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 TAS2R45P59539 299 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 FAM78BQ5VT40 261 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 SFT2D1Q8WV19 159 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 RNF125Q96EQ8 232 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 METTL26Q96S19 204 aa8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CITED2Q99967 270 aaPredicted RBP8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 TECRQ9NZ01 308 aaKnown RBP8.25□□□□□ -1.09
TNFRSF1A-211ENST00000538363 MXRA5Q9NR99 2828 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IGHV3OR16-8A0A075B7F1 116 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 LINC01619G3V211 115 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 M0QZ24 198 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 NDUFA4O00483 81 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IGKV1-17P01599 117 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 HBE1P02100 147 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 PROK1P58294 105 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms