RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CA2P00918 260 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 IFNA10P01566 189 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 IGLV2-23P01705 113 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 HSPB1P04792 205 aaKnown RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 OR13C7P0DN81 318 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 UCP1P25874 307 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 G6PCP35575 357 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 RPS10P46783 165 aaKnown RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 CDX1P47902 265 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 SSTP61278 116 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 RPL8P62917 257 aaKnown RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 VAMP2P63027 116 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 SLC35B1P78383 322 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 CX3CL1P78423 397 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 DEFA6Q01524 100 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 BAXQ07812 192 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM267Q0VDI3 215 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 FXYD3Q14802 87 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 PRSS8Q16651 343 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF674Q2M3X9 581 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM95Q3KNT9 176 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 KRTAP24-1Q3LI83 254 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF506Q5JVG8 444 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 AKR1C8PQ5T2L2 129 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF562Q6V9R5 426 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 C12orf54Q6X4T0 127 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF600Q6ZNG1 722 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 Q6ZSV7 163 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 CENPVQ7Z7K6 275 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 MMD2Q8IY49 270 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 Q8N2B8 174 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 FAM24BQ8N5W8 94 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 C3orf56Q8N813 242 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 HSD17B11Q8NBQ5 300 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 OR4D5Q8NGN0 318 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 OR10G4Q8NGN3 311 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 OR2G3Q8NGZ4 309 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 OR4A16Q8NH70 328 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 LINC01006Q8NI28 216 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 BSCL2Q96G97 398 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 YPEL4Q96NS1 127 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 HSPB9Q9BQS6 159 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 NIPSNAP3BQ9BS92 247 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 GGACTQ9BVM4 153 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 COMMD5Q9GZQ3 224 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 SH3BGRL3Q9H299 93 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 C16orf95Q9H693 158 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF430Q9H8G1 570 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF702PQ9H963 129 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 FKBP11Q9NYL4 201 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 PRNDQ9UKY0 176 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 PUS1Q9Y606 427 aaKnown RBP eCLIP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 NBPF19A0A087WUL8 3843 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 IGHV7-81A0A0B4J1V7 117 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 TRAV41A0A0B4J266 112 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 A0A1B0GV50 99 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 IGSF23A1L1A6 192 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM89A2RUT3 159 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 PSMB11A5LHX3 300 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 TSTD3H0UI37 97 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 H3BQ15 152 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 UPK2O00526 184 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 PPP1R2P9O14990 202 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 ATP6V0E1O15342 81 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 DFFBO76075 338 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 IFNA1P01562 189 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 IGHG2P01859 326 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 CRYGBP07316 175 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 SRP19P09132 144 aaKnown RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 MDKP21741 143 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 ATP6V0CP27449 155 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 TAGLN2P37802 199 aaKnown RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 NKX2-1P43699 371 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 COMPP49747 757 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 FHITP49789 147 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 NDUFA6P56556 154 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 BRWD1-AS2P59051 145 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 PNRC1Q12796 327 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 POU2AF1Q16633 256 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 ECSCRQ19T08 205 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF585BQ52M93 769 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 UNQ5815/PRO19632Q6UWF5 114 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 LYZL2Q7Z4W2 148 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF429Q86V71 674 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 STX12Q86Y82 276 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 KLHDC1Q8N7A1 406 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 SLC35G3Q8N808 338 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 Q8N9P0 234 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 OR4X2Q8NGF9 303 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 OR5B3Q8NH48 314 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 SGMS2Q8NHU3 365 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM167AQ8TBQ9 72 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 SRSF12Q8WXF0 261 aaKnown RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 TAF15Q92804 592 aaKnown RBP eCLIP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 IL22RA2Q969J5 263 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 TVP23CQ96ET8 276 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM56Q96MV1 263 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 NOL4LQ96MY1 436 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-208ENST00000538266 ATP5SQ99766 215 aa3.37□□□□□ -1.87
SNHG1-208ENST00000538266 HINT2Q9BX68 163 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms