RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PSG1P11464 419 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 INSL3P51460 131 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 NKX2-5P52952 324 aaPredicted RBP9.83□□□□□ -0.84
CHFR-216ENST00000538235 ELLP55199 621 aaPredicted RBP9.83□□□□□ -0.84
CHFR-216ENST00000538235 ATP5IP56385 69 aaPredicted RBP9.83□□□□□ -0.84
CHFR-216ENST00000538235 RAB11AP62491 216 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 OR2F1Q13607 317 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 SLC51BQ86UW2 128 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 Q8N1Y9 231 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 TMEM252Q8N6L7 170 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 SLC35E1Q96K37 410 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 SMPXQ9UHP9 88 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 K7EMT4 169 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 CHEK1O14757 476 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 YIF1AO95070 293 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 MPC2O95563 127 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 GP9P14770 177 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 CAV2P51636 162 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 YPEL3P61236 119 aaPredicted RBP9.82□□□□□ -0.84
CHFR-216ENST00000538235 DLK1P80370 383 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 RELQ04864 619 aaPredicted RBP9.82□□□□□ -0.84
CHFR-216ENST00000538235 FAM90A2PQ658T7 463 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 RNF2Q99496 336 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 VSIRQ9H7M9 311 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 GAR1Q9NY12 217 aaKnown RBP9.82□□□□□ -0.84
CHFR-216ENST00000538235 MBD2Q9UBB5 411 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 PRELID1Q9Y255 219 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 UFC1Q9Y3C8 167 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 LSM4Q9Y4Z0 139 aaKnown RBP9.82□□□□□ -0.84
CHFR-216ENST00000538235 U3KQE9 123 aa9.82□□□□□ -0.84
CHFR-216ENST00000538235 L7N2F9 121 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 CD7P09564 240 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 VAMP2P63027 116 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 EWSR1Q01844 656 aaKnown RBP eCLIP9.81□□□□□ -0.84
CHFR-216ENST00000538235 NHLH2Q02577 135 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 SLC38A11Q08AI6 406 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 ETFRF1Q6IPR1 90 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 TMEM217Q8N7C4 229 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 OR51G1Q8NGK1 321 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 DYNLRB2Q8TF09 96 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 TRGV9Q99603 122 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 MGST2Q99735 147 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 RHPN1-AS1Q9BWJ2 59 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 GPR61Q9BZJ8 451 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 MRPL27Q9P0M9 148 aaKnown RBP9.81□□□□□ -0.84
CHFR-216ENST00000538235 TENM3Q9P273 2699 aa9.81□□□□□ -0.84
CHFR-216ENST00000538235 TGP01266 2768 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 AGRNO00468 2067 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 ZFP92A6NM28 416 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 IL4P05112 153 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 LYL1P12980 280 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 CRYBB3P26998 211 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 AKR1C1Q04828 323 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 VWC2Q2TAL6 325 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 TMEM144Q7Z5S9 345 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 FAM24BQ8N5W8 94 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 C17orf77Q96MU5 243 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 MED28Q9H204 178 aa9.8□□□□□ -0.84
CHFR-216ENST00000538235 TRAV30A0A087WSZ9 112 aa9.79□□□□□ -0.84
CHFR-216ENST00000538235 SMCO3A2RU48 225 aa9.79□□□□□ -0.84
CHFR-216ENST00000538235 LY86O95711 162 aa9.79□□□□□ -0.84
CHFR-216ENST00000538235 SULT1A1P50225 295 aa9.79□□□□□ -0.84
CHFR-216ENST00000538235 RPP30P78346 268 aaKnown RBP9.79□□□□□ -0.84
CHFR-216ENST00000538235 RNF125Q96EQ8 232 aa9.79□□□□□ -0.84
CHFR-216ENST00000538235 UBE2L5PA0A1B0GUS4 154 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 SMLR1H3BR10 107 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 RD3LP0DJH9 198 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 P2RY1P47900 373 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 CYP2G1PQ6ZSU1 146 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 OR10P1Q8NGE3 313 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 LRRC20Q8TCA0 184 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 MRAPQ8TCY5 172 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 GLMPQ8WWB7 406 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 MARC2Q969Z3 335 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 CITED4Q96RK1 184 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 WFDC1Q9HC57 220 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 TECRQ9NZ01 308 aaKnown RBP9.78□□□□□ -0.84
CHFR-216ENST00000538235 WDR83OSQ9Y284 106 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 RFNGQ9Y644 331 aa9.78□□□□□ -0.84
CHFR-216ENST00000538235 IGKV3-7A0A075B6H7 116 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 E5RGE8 158 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 FNDC10F2Z333 226 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 DFFBO76075 338 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 LINC00869P0C866 280 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 LYZP61626 148 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 ZNF124Q15973 351 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 ODF3L2Q3SX64 289 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 MORN5Q5VZ52 161 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 LCN12Q6JVE5 192 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 PATE2Q6UY27 113 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 OR2K2Q8NGT1 345 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 Q8WTZ3 238 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 ASB13Q8WXK3 278 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 PBDC1Q9BVG4 233 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 GGTLC1Q9BX51 225 aa9.77□□□□□ -0.85
CHFR-216ENST00000538235 LOC105371267A0A1B0GV96 52 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 TSPAN4O14817 238 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 AGPAT2O15120 278 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms