RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 PLA2G5P39877 138 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 UBE2E1P51965 193 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 MFAP2P55001 183 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
USP28-206ENST00000538224 LY6DQ14210 128 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 EBI3Q14213 229 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 HES1Q14469 280 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 FXYD3Q14802 87 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 IBA57Q5T440 356 aaKnown RBP5.28□□□□□ -1.56
USP28-206ENST00000538224 ZNF562Q6V9R5 426 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 OR5R1Q8NH85 324 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 ARPC1AQ92747 370 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 PACRGQ96M98 296 aaPredicted RBP5.28□□□□□ -1.56
USP28-206ENST00000538224 ATG101Q9BSB4 218 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 C2orf88Q9BSF0 95 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 GNB1LQ9BYB4 327 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 WNT10AQ9GZT5 417 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 SIRPDQ9H106 197 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 LPAR2Q9HBW0 351 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 V9GYV3 84 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 DCHS1Q96JQ0 3298 aa5.28□□□□□ -1.56
USP28-206ENST00000538224 TRAV5A0A0B4J249 113 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 LY6HO94772 140 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 TOX4O94842 621 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 HLA-DQA1P01909 254 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 SLC25A5P05141 298 aaKnown RBP5.27□□□□□ -1.57
USP28-206ENST00000538224 NBEAP1P0C6P0 100 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 FAM106CPP0CH98 169 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 RNF224P0DH78 156 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 RD3LP0DJH9 198 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 PYYP10082 97 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 MGST1P10620 155 aaKnown RBP5.27□□□□□ -1.57
USP28-206ENST00000538224 GP9P14770 177 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 FABP4P15090 132 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 TMEM11P17152 192 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 HNF1AP20823 631 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 MYCNOSP40205 109 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 MFAP4P55083 255 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 LYZP61626 148 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 CX3CL1P78423 397 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 KLRD1Q13241 179 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 TMEM183BQ1AE95 376 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 MORN5Q5VZ52 161 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 REC114Q7Z4M0 266 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 BAGE2Q86Y30 109 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 BPIFA4PQ86YQ2 179 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 ADGRG4Q8IZF6 3080 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 LYPD1Q8N2G4 141 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 Q8N6K4 173 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 OR4F17Q8NGA8 305 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 OR10D4PQ8NGN7 298 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 TXN2Q99757 166 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 HIST1H2BLQ99880 126 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 OTORQ9NRC9 128 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 AURKAIP1Q9NWT8 199 aaPredicted RBP5.27□□□□□ -1.57
USP28-206ENST00000538224 MRPL36Q9P0J6 103 aaKnown RBP5.27□□□□□ -1.57
USP28-206ENST00000538224 EPDR1Q9UM22 224 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 KLF12Q9Y4X4 402 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 HILPDAQ9Y5L2 63 aa5.27□□□□□ -1.57
USP28-206ENST00000538224 HRNRQ86YZ3 2850 aaPredicted RBP5.27□□□□□ -1.57
USP28-206ENST00000538224 SPTBN4Q9H254 2564 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 IGLV11-55A0A075B6I3 123 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 TRBV6-1A0A0K0K1D8 114 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 SERTM2A0A1B0GWG4 89 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 SMIM27A0A1W2PRY6 76 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 FBLL1A6NHQ2 334 aaKnown RBP5.26□□□□□ -1.57
USP28-206ENST00000538224 IFITM10A6NMD0 228 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 ZNF705GA8MUZ8 300 aaPredicted RBP5.26□□□□□ -1.57
USP28-206ENST00000538224 H3BRN7 92 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 K7EIM0 57 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 K7EQM0 130 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 NDUFS8O00217 210 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 FCN1O00602 326 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 GNG7O60262 68 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 IGHV3-48P01763 117 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 HLA-DRB1P01911 266 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 AMY1AP04745 511 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 PSG1P11464 419 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 FCGR2BP31994 310 aaPredicted RBP5.26□□□□□ -1.57
USP28-206ENST00000538224 CDKN1AP38936 164 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 DLX1P56177 255 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 RANP62826 216 aaKnown RBP5.26□□□□□ -1.57
USP28-206ENST00000538224 PDE6HQ13956 83 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 USF2Q15853 346 aaPredicted RBP5.26□□□□□ -1.57
USP28-206ENST00000538224 CLEC12BQ2HXU8 276 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 TMEM95Q3KNT9 176 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 CT83Q5H943 113 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 PYY3Q5JQD4 70 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 C16orf54Q6UWD8 224 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 ATP5L2Q7Z4Y8 100 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 LHFPL4Q7Z7J7 247 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 OR8I2Q8N0Y5 310 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 TTC9CQ8N5M4 171 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 CMTM2Q8TAZ6 248 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 GRAMD2BQ96HH9 432 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 GPR82Q96P67 336 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 SLC25A39Q9BZJ4 359 aaPredicted RBP5.26□□□□□ -1.57
USP28-206ENST00000538224 MRPL18Q9H0U6 180 aaKnown RBP5.26□□□□□ -1.57
USP28-206ENST00000538224 ZNF492Q9P255 531 aa5.26□□□□□ -1.57
USP28-206ENST00000538224 POLR3KQ9Y2Y1 108 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms