RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 IGKV1-17P01599 117 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 GP9P14770 177 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 HOXB4P17483 251 aaPredicted RBP9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 CD24P25063 80 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 RANP62826 216 aaKnown RBP9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 EBI3Q14213 229 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 FBLN7Q53RD9 439 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 DYNAPQ8N1N2 210 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 IGFBPL1Q8WX77 278 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 SIRPDQ9H106 197 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 EPDR1Q9UM22 224 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 HIGD1AQ9Y241 93 aa9.05□□□□□ -0.96
SLC28A1-204ENST00000538177 UQCRFS1P47985 274 aa9.04□□□□□ -0.96
SLC28A1-204ENST00000538177 CX3CL1P78423 397 aa9.04□□□□□ -0.96
SLC28A1-204ENST00000538177 IBA57Q5T440 356 aaKnown RBP9.04□□□□□ -0.96
SLC28A1-204ENST00000538177 ZNF562Q6V9R5 426 aa9.04□□□□□ -0.96
SLC28A1-204ENST00000538177 Q8N6K4 173 aa9.04□□□□□ -0.96
SLC28A1-204ENST00000538177 MRPL27Q9P0M9 148 aaKnown RBP9.04□□□□□ -0.96
SLC28A1-204ENST00000538177 KLF12Q9Y4X4 402 aa9.04□□□□□ -0.96
SLC28A1-204ENST00000538177 TRBV9A0A0B4J1U6 114 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 MGST1P10620 155 aaKnown RBP9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 HIST1H1BP16401 226 aaKnown RBP9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 GNLYP22749 145 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 ADMP35318 185 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 HES1Q14469 280 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 TMEM183BQ1AE95 376 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 CDPF1Q6NVV7 123 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 FAM231DQ6ZW35 169 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 BAGE2Q86Y30 109 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 OR8I2Q8N0Y5 310 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 RASL11BQ9BPW5 248 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 TMEM14CQ9P0S9 112 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 TRAV34A0A0B4J273 112 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 SMIM27A0A1W2PRY6 76 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 PGPA6NDG6 321 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 LINC00587B1AMM8 73 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 C19orf84I3L1E1 186 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 SLC25A5P05141 298 aaKnown RBP9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 RD3LP0DJH9 198 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 CBLN1P23435 193 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 LYZP61626 148 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 RPL19P84098 196 aaKnown RBP9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 BLNKQ8WV28 456 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 GNB1LQ9BYB4 327 aa9.03□□□□□ -0.96
SLC28A1-204ENST00000538177 IGHV2-70DA0A0C4DH43 119 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 NPIPB5A8MRT5 1133 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 SNRPCP09234 159 aaKnown RBP9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 ZNF600Q6ZNG1 722 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 GBGT1Q8N5D6 347 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 FAM103A1Q9BTL3 118 aaKnown RBP9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 SLC25A39Q9BZJ4 359 aaPredicted RBP9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 MRPL18Q9H0U6 180 aaKnown RBP9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 IER3P46695 156 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 LMO4P61968 165 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 GNG5P63218 68 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 CTAG1AP78358 180 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 JOSD1Q15040 202 aaPredicted RBP9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 COX19Q49B96 90 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 ASPHD1Q5U4P2 390 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 LEMD1Q68G75 181 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 TTC9CQ8N5M4 171 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 C5orf17Q8NAS9 161 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 NHLRC2Q8NBF2 726 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 TMEM18Q96B42 140 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 MBD6Q96DN6 1003 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 SMIM12Q96EX1 92 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 RBM14Q96PK6 669 aaKnown RBP9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 FANCD2OSQ96PS1 177 aa9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 TBL2Q9Y4P3 447 aaKnown RBP9.02□□□□□ -0.97
SLC28A1-204ENST00000538177 IGLV11-55A0A075B6I3 123 aa9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 OVOL3O00110 214 aa9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 FRMD6-AS1P0C7T7 363 aa9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 HIST1H1EP10412 219 aaKnown RBP9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 ARPC1AQ92747 370 aa9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 TMEM68Q96MH6 324 aa9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 ATG101Q9BSB4 218 aa9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 C7orf69Q9H7B7 122 aa9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 MED13LQ71F56 2210 aa9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 WNK2Q9Y3S1 2297 aa9.01□□□□□ -0.97
SLC28A1-204ENST00000538177 ZNF705GA8MUZ8 300 aaPredicted RBP9□□□□□ -0.97
SLC28A1-204ENST00000538177 TOMM40O96008 361 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 MT-ND6P03923 174 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 UBE2E1P51965 193 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 UBE2G1P62253 170 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 NDPQ00604 133 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 KLF17Q5JT82 389 aaPredicted RBP9□□□□□ -0.97
SLC28A1-204ENST00000538177 WDR73Q6P4I2 378 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 OR5R1Q8NH85 324 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 AJUBAQ96IF1 538 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 ZNF48Q96MX3 618 aaPredicted RBP9□□□□□ -0.97
SLC28A1-204ENST00000538177 TBX15Q96SF7 602 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 SHANK2-AS3Q9BTD1 123 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 Q9H3A6 140 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 PRDM13Q9H4Q3 707 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 SERTAD4Q9NUC0 356 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 TRAV30A0A087WSZ9 112 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 NCBP2LA6PVI3 153 aaKnown RBP9□□□□□ -0.97
SLC28A1-204ENST00000538177 SNURFLB1AK76 121 aa9□□□□□ -0.97
SLC28A1-204ENST00000538177 GATCO43716 136 aaKnown RBP9□□□□□ -0.97
SLC28A1-204ENST00000538177 TOX4O94842 621 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms