RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 FA2HQ7L5A8 372 aa8.69□□□□□ -1.02
RTN3-208ENST00000537981 CEP192Q8TEP8 1941 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 SYT8Q8NBV8 401 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 ZNF418Q8TF45 676 aaPredicted RBP8.68□□□□□ -1.02
RTN3-208ENST00000537981 PHLDA1Q8WV24 401 aaPredicted RBP8.68□□□□□ -1.02
RTN3-208ENST00000537981 ZNF747Q9BV97 191 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 LINC00312Q9Y6C7 94 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 INTS1Q8N201 2190 aaKnown RBP8.68□□□□□ -1.02
RTN3-208ENST00000537981 A0A1W2PRD5 423 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 A0A1W2PRF3 423 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 A0A1W2PRM7 423 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 FAM90A10PA6NDY2 464 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 FAM90A8PA6NJQ4 464 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 A8MWL6 223 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 FAM90A13PP0C7W8 464 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 FAM90A24PP0C7X0 464 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 EIF4EBP1Q13541 118 aaPredicted RBP8.68□□□□□ -1.02
RTN3-208ENST00000537981 ZNF645Q8N7E2 425 aa8.68□□□□□ -1.02
RTN3-208ENST00000537981 NAV3Q8IVL0 2385 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 IGKV1OR2-108A0A075B7D4 117 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 A0A096LNJ9 63 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 FAM90A27PA6NNH2 459 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 WISP2O76076 250 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 IGHV3-13P01766 116 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 KIR2DL2P43627 348 aaPredicted RBP8.67□□□□□ -1.02
RTN3-208ENST00000537981 ANKRD37Q7Z713 158 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 GCSAMQ8N6F7 178 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 FADS6Q8N9I5 356 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 CHCHD1Q96BP2 118 aaKnown RBP8.67□□□□□ -1.02
RTN3-208ENST00000537981 COL25A1Q9BXS0 654 aaPredicted RBP8.67□□□□□ -1.02
RTN3-208ENST00000537981 SRXN1Q9BYN0 137 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 OR2H1Q9GZK4 316 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 NHP2Q9NX24 153 aaKnown RBP8.67□□□□□ -1.02
RTN3-208ENST00000537981 UFC1Q9Y3C8 167 aa8.67□□□□□ -1.02
RTN3-208ENST00000537981 IGKV2D-26A0A0A0MRZ7 120 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 GFRA3O60609 400 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 NGFP01138 241 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 CD3EP07766 207 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 SMIM13P0DJ93 91 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 PYYP10082 97 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 MLANAQ16655 118 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 MKXQ8IYA7 352 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 GRAMD2BQ96HH9 432 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 ADTRPQ96IZ2 230 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 TM2D2Q9BX73 214 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 LOXL2Q9Y4K0 774 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 GABRG2P18507 467 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 ID1P41134 155 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 CACNG7P62955 275 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 HBBP68871 147 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 SLC25A53Q5H9E4 307 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 Q6P435 159 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 FAM90A1Q86YD7 464 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 BCL6BQ8N143 479 aaPredicted RBP8.66□□□□□ -1.02
RTN3-208ENST00000537981 PLEKHA3Q9HB20 300 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 PROK2Q9HC23 129 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 FZR1Q9UM11 496 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 PCNX2A6NKB5 2137 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 URB1O60287 2271 aaKnown RBP8.66□□□□□ -1.02
RTN3-208ENST00000537981 PRR14LQ5THK1 2151 aa8.66□□□□□ -1.02
RTN3-208ENST00000537981 NPIPB11E5RHQ5 1161 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 PRRG2O14669 202 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 KIR2DL1P43626 348 aaPredicted RBP8.65□□□□□ -1.02
RTN3-208ENST00000537981 RUNX3Q13761 415 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 KRTAP27-1Q3LI81 207 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 GALMQ96C23 342 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 NABP2Q9BQ15 211 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 NDFIP1Q9BT67 221 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 C7orf69Q9H7B7 122 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 TRBV6-6A0A0A6YYG2 114 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 OR11H12B2RN74 326 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 APOHP02749 345 aaPredicted RBP8.65□□□□□ -1.02
RTN3-208ENST00000537981 PRR20EP86478 221 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 PRR20CP86479 221 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 PRR20DP86480 221 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 PRR20BP86481 221 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 PRR20AP86496 221 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 RASL11AQ6T310 242 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 NFE4Q86UQ8 179 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 OR11H1Q8NG94 326 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 OR11H2Q8NH07 326 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 OR4A16Q8NH70 328 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 PRDM14Q9GZV8 571 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 PRO0461Q9UI25 63 aa8.65□□□□□ -1.02
RTN3-208ENST00000537981 LOC400499M0QZD8 3231 aa8.65□□□□□ -1.03
RTN3-208ENST00000537981 KIR2DS5A0A0G2JLQ3 304 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 A0A0G2JNG1 304 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 ZNF503-AS2A6NEH8 195 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 KIR2DS3K7RE56 304 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 LAMTOR5O43504 91 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 MPDU1O75352 247 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 OR2H2O95918 312 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 TAS2R45P59539 299 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 KIR2DS5Q14953 304 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 ZNF497Q6ZNH5 498 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 RFESDQ8TAC1 157 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 PRRG4Q9BZD6 226 aa8.64□□□□□ -1.03
RTN3-208ENST00000537981 TNRC6BQ9UPQ9 1833 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms