RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 LINC00473A8K010 186 aa9.24□□□□□ -0.93
SEMA4D-221ENST00000537934 GNG3P63215 75 aa9.24□□□□□ -0.93
SEMA4D-221ENST00000537934 AAED1Q7RTV5 226 aa9.24□□□□□ -0.93
SEMA4D-221ENST00000537934 LINC00470Q9BZP3 86 aa9.24□□□□□ -0.93
SEMA4D-221ENST00000537934 CCNOP22674 350 aa9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 TAS2R45P59539 299 aa9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 TUSC5Q8IXB3 177 aa9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 ZADH2Q8N4Q0 377 aa9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 NABP2Q9BQ15 211 aa9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 SPANXB1Q9NS25 103 aaPredicted RBP9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 SSUH2Q9Y2M2 353 aa9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 SOX21Q9Y651 276 aaPredicted RBP9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 SMAD7O15105 426 aaKnown RBP9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 DUTP33316 252 aaKnown RBP9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 LINC00479Q96M42 142 aa9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 VGLL1Q99990 258 aa9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 PRRG4Q9BZD6 226 aa9.23□□□□□ -0.93
SEMA4D-221ENST00000537934 SMIM13P0DJ93 91 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 CD24P25063 80 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 PRAMEF5Q5TYX0 476 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 PRAMEF6Q5VXH4 476 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 MED12LQ86YW9 2145 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 NEU4Q8WWR8 484 aaPredicted RBP9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 NANOS1Q8WY41 292 aaKnown RBP9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 ABHD17AQ96GS6 310 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 ZNF747Q9BV97 191 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 F8W1H4 67 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 TSPAN13O95857 204 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 IGHV3-7P01780 117 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 LINC00205P59089 165 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 LTC4SQ16873 150 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 PRR31Q5SQ13 230 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 FAM53AQ6NSI3 398 aaPredicted RBP9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 TMUB1Q9BVT8 246 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 C19orf24Q9BVV8 132 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 MPC1Q9Y5U8 109 aa9.22□□□□□ -0.93
SEMA4D-221ENST00000537934 SPTA1P02549 2419 aa9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 C12orf77C9JDV5 145 aa9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 FNDC10F2Z333 226 aa9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 SS18L1O75177 396 aaPredicted RBP9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 NGFP01138 241 aa9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 IGFL3Q6UXB1 125 aa9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 RBMXL3Q8N7X1 1067 aaKnown RBP9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 PLPPR2Q96GM1 343 aa9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 C7orf69Q9H7B7 122 aa9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 MRPL16Q9NX20 251 aaKnown RBP9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 SIGLEC8Q9NYZ4 499 aa9.21□□□□□ -0.93
SEMA4D-221ENST00000537934 IGKV3D-15A0A087WSY6 115 aa9.21□□□□□ -0.94
SEMA4D-221ENST00000537934 TRGV8A0A0C4DH27 118 aa9.21□□□□□ -0.94
SEMA4D-221ENST00000537934 C5orf49A4QMS7 147 aa9.21□□□□□ -0.94
SEMA4D-221ENST00000537934 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.21□□□□□ -0.94
SEMA4D-221ENST00000537934 J3QT63 122 aa9.21□□□□□ -0.94
SEMA4D-221ENST00000537934 MRPL33O75394 65 aaKnown RBP9.21□□□□□ -0.94
SEMA4D-221ENST00000537934 IGHG3P01860 377 aa9.21□□□□□ -0.94
SEMA4D-221ENST00000537934 AMMECR1Q9Y4X0 333 aaPredicted RBP9.21□□□□□ -0.94
SEMA4D-221ENST00000537934 ESPL1Q14674 2120 aa9.21□□□□□ -0.94
SEMA4D-221ENST00000537934 NCR2O95944 276 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 CCL2P13500 99 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 FCGR2BP31994 310 aaPredicted RBP9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 ZNF138P52744 262 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 GCSAMQ8N6F7 178 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 SPAG8Q99932 426 aaPredicted RBP9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 INSIG2Q9Y5U4 225 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 CACNA1AO00555 2505 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 USF3Q68DE3 2245 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 TEX50A0A1B0GTY4 177 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 FOXG1P55316 489 aaPredicted RBP9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 NRN1LQ496H8 165 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 Q6ZS92 163 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 Q8IYB0 196 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 ATRXP46100 2492 aa9.2□□□□□ -0.94
SEMA4D-221ENST00000537934 TMEM30CPA0ZSE6 113 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 OOEPA6NGQ2 149 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 OR11H12B2RN74 326 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 K7ENP7 123 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 MGST3O14880 152 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 C8orf88P0DMB2 117 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 INO80CQ6PI98 192 aaPredicted RBP9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 OR11H1Q8NG94 326 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 OR11H2Q8NH07 326 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 GTSF1Q8WW33 167 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 TCF19Q9Y242 345 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 ADGRG4Q8IZF6 3080 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 GPR12P47775 334 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 WFDC2Q14508 124 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 ZNF146Q15072 292 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 SLC25A33Q9BSK2 321 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 C12orf49Q9H741 205 aa9.19□□□□□ -0.94
SEMA4D-221ENST00000537934 FBLL1A6NHQ2 334 aaKnown RBP9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 A8MWL6 223 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 PEX7O00628 323 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 FCGR3BO75015 233 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 CSN1S1P47710 185 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 ERVK11-1P61568 191 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 FOXF2Q12947 444 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 ACP7Q6ZNF0 438 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 RPP21Q9H633 154 aaKnown RBP9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 ZNF71Q9NQZ8 489 aaPredicted RBP9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 TIMM8BQ9Y5J9 83 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms