RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 MPDU1O75352 247 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 EIF3GO75821 320 aaKnown RBP eCLIP12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 YIF1AO95070 293 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 LGALS1P09382 135 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 PSG1P11464 419 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 ARL3P36405 182 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 PRR20EP86478 221 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 PRR20CP86479 221 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 PRR20DP86480 221 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 PRR20BP86481 221 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 PRR20AP86496 221 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 AWAT1Q58HT5 328 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 LURAP1LQ8IV03 231 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 OR2G3Q8NGZ4 309 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 WFDC12Q8WWY7 111 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 NUPL2O15504 423 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 CDX1P47902 265 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 FFAR4Q5NUL3 377 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 UQCC3Q6UW78 93 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 ZNF709Q8N972 641 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 KLHL30-AS1Q8NEE0 82 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 GNPNAT1Q96EK6 184 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 C19orf24Q9BVV8 132 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 SLC39A9Q9NUM3 307 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 DOK5Q9P104 306 aa12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 PEF1Q9UBV8 284 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-206ENST00000537582 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 A0A087WW49 117 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 RAB19A4D1S5 217 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 NUDT19A8MXV4 375 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 OR2C1O95371 312 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 RD3LP0DJH9 198 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 RPL29P47914 159 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 RAB2AP61019 212 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 B2MP61769 119 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 ZNF616Q08AN1 781 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 FOXL1Q12952 345 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 RAB31Q13636 194 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 C8orf86Q6ZUL3 223 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 RCC1LQ96I51 464 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 TIMM9Q9Y5J7 89 aa12.04□□□□□ -0.48
SFSWAP-206ENST00000537582 TRAV30A0A087WSZ9 112 aa12.03□□□□□ -0.48
SFSWAP-206ENST00000537582 ADARB2-AS1A8MUL3 147 aa12.03□□□□□ -0.48
SFSWAP-206ENST00000537582 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
SFSWAP-206ENST00000537582 TOMM40O96008 361 aa12.03□□□□□ -0.48
SFSWAP-206ENST00000537582 SEC11BP0C7V7 166 aa12.03□□□□□ -0.48
SFSWAP-206ENST00000537582 FHITP49789 147 aa12.03□□□□□ -0.48
SFSWAP-206ENST00000537582 C4orf3Q8WVX3 66 aa12.03□□□□□ -0.48
SFSWAP-206ENST00000537582 PSMG3Q9BT73 122 aaPredicted RBP12.03□□□□□ -0.48
SFSWAP-206ENST00000537582 PUS1Q9Y606 427 aaKnown RBP eCLIP12.03□□□□□ -0.48
SFSWAP-206ENST00000537582 A0A1B0GUS0 222 aa12.02□□□□□ -0.49
SFSWAP-206ENST00000537582 TSPAN15O95858 294 aa12.02□□□□□ -0.49
SFSWAP-206ENST00000537582 YPEL3P61236 119 aaPredicted RBP12.02□□□□□ -0.49
SFSWAP-206ENST00000537582 LYZP61626 148 aa12.02□□□□□ -0.49
SFSWAP-206ENST00000537582 UNQ9165/PRO28630Q6UXU0 137 aa12.02□□□□□ -0.49
SFSWAP-206ENST00000537582 OR51G1Q8NGK1 321 aa12.02□□□□□ -0.49
SFSWAP-206ENST00000537582 RNF141Q8WVD5 230 aa12.02□□□□□ -0.49
SFSWAP-206ENST00000537582 TEX46H3BTG2 121 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 SCO1O75880 301 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 IL4P05112 153 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 ORM2P19652 201 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 USF2Q15853 346 aaPredicted RBP12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 NSUN5P1Q3KNT7 163 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 EIF5AL1Q6IS14 154 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 SPSB3Q6PJ21 355 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 TOMM20LQ6UXN7 152 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 PATE2Q6UY27 113 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 ATP6V0BQ99437 205 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 PBDC1Q9BVG4 233 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 ZFAND3Q9H8U3 227 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 GAR1Q9NY12 217 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 TSSC4Q9Y5U2 329 aaPredicted RBP12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 ZNF207O43670 478 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 GGCTO75223 188 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 SELENOTP62341 195 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 MORN5Q5VZ52 161 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 SPATA31B1PQ5VZV4 182 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 ZNF600Q6ZNG1 722 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 SSX7Q7RTT5 188 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 OR1B1Q8NGR6 318 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 TMEM37Q8WXS4 190 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 MARC2Q969Z3 335 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 SAT2Q96F10 170 aaPredicted RBP12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 UHRF2Q96PU4 802 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 RPRMQ9NS64 109 aa12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 TMA7Q9Y2S6 64 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-206ENST00000537582 WI2-2373I1.2A0A1W2PRP0 233 aa12□□□□□ -0.49
SFSWAP-206ENST00000537582 EDN2P20800 178 aa12□□□□□ -0.49
SFSWAP-206ENST00000537582 SLURP1P55000 103 aa12□□□□□ -0.49
SFSWAP-206ENST00000537582 OR11H1Q8NG94 326 aa12□□□□□ -0.49
SFSWAP-206ENST00000537582 Q8WTZ3 238 aa12□□□□□ -0.49
SFSWAP-206ENST00000537582 RNF125Q96EQ8 232 aa12□□□□□ -0.49
SFSWAP-206ENST00000537582 RAX2Q96IS3 184 aa12□□□□□ -0.49
SFSWAP-206ENST00000537582 HSPB1P04792 205 aaKnown RBP11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 HOXD3P31249 432 aaPredicted RBP11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 SERF2P84101 59 aa11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 ZNF726P1Q15940 193 aa11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 AKR1C8PQ5T2L2 129 aa11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 FAM122CQ6P4D5 195 aa11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 IL34Q6ZMJ4 242 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms