RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 KRTAP27-1Q3LI81 207 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 KLF17Q5JT82 389 aaPredicted RBP6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 TMEM78Q5T7P6 136 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 ZNF497Q6ZNH5 498 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 RBMXL3Q8N7X1 1067 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 OR10J6PQ8NGY7 276 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 PLPPR2Q96GM1 343 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 KLF12Q9Y4X4 402 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 B4GALT1P15291 398 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 ZNF32P17041 273 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 ACP1P24666 158 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 BRWD1-AS2P59051 145 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 PCBD1P61457 104 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 RIGQ13278 110 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 GAB4Q2WGN9 574 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 UBALD1Q8TB05 177 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 CARD19Q96LW7 228 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 KIR2DL4Q99706 377 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 NGBQ9NPG2 151 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 DIDO1Q9BTC0 2240 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 A0A096LNJ9 63 aa6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 TRGV8A0A0C4DH27 118 aa6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 SMIM9A6NGZ8 99 aa6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 C16orf97H3BN30 126 aa6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 HOXA3O43365 443 aaPredicted RBP6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 NDUFS7O75251 213 aa6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 MOB3BQ86TA1 216 aa6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 HIST1H4GQ99525 98 aa6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 RASL11BQ9BPW5 248 aa6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 OBP2AQ9NY56 170 aa6.9□□□□□ -1.31
SRGAP1-202ENST00000537556 A8MWV9 139 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 MOSP00540 346 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 IFI27P40305 119 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 ERVK-16P61578 105 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 SLC25A48Q6ZT89 311 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 ZNF329Q86UD4 541 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 TMEM158Q8WZ71 300 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 AKIRIN1Q9H9L7 192 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 MUC22E2RYF6 1773 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 A0A1B0GUT8 65 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 SRRM4A7MD48 611 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 CEACAM4O75871 244 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 DUTP33316 252 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 SLC37A2Q8TED4 501 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 SLC25A2Q9BXI2 301 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 ENY2Q9NPA8 101 aa6.89□□□□□ -1.31
SRGAP1-202ENST00000537556 IGKV2D-26A0A0A0MRZ7 120 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 TMEM213A2RRL7 107 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 C19orf71A6NCJ1 209 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 DNPH1O43598 174 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 FCER1GP30273 86 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 HHEXQ03014 270 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 ZNF766Q5HY98 468 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 PRDM14Q9GZV8 571 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 UBTD1Q9HAC8 227 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 MDFICQ9P1T7 246 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 DKK2Q9UBU2 259 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 USP34Q70CQ2 3546 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 PTPRSQ13332 1948 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 PSMB2P49721 201 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 ESPL1Q14674 2120 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 FGFBP3Q8TAT2 258 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 OR2H1Q9GZK4 316 aa6.88□□□□□ -1.31
SRGAP1-202ENST00000537556 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 A0A1W2PPI3 338 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 MYOD1P15172 320 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 COL8A2P25067 703 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 KIR2DS2P43631 304 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 LY6DQ14210 128 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 GATD1Q8NB37 220 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 ZNF837Q96EG3 531 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 RITA1Q96K30 269 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 HHLA3Q9XRX5 114 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 ARHGEF17Q96PE2 2063 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 IGLV3-32A0A0A0MS00 114 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 A0A1W2PQF6 199 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 IGKCP01834 107 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 FAM106CPP0CH98 169 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 COL8A1P27658 744 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 LINC01559Q495D7 138 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 FAM106AQ4KMX7 169 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 ZNF542PQ5EBM4 170 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 CIARTQ8N365 385 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 AJUBAQ96IF1 538 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 ZNF488Q96MN9 340 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 PAXXQ9BUH6 204 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 PRRG4Q9BZD6 226 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 ZMAT4Q9H898 229 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 EPDR1Q9UM22 224 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 SIGLEC9Q9Y336 463 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 TNRC18O15417 2968 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 ZNF407Q9C0G0 2248 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 LOC389332A0A1B0GUA5 103 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 LINC00473A8K010 186 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 K7EMI3 77 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 PATE4P0C8F1 98 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 SCGB1C2P0DMR2 95 aa6.87□□□□□ -1.31
SRGAP1-202ENST00000537556 TNFRSF1AP19438 455 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms