RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 RASL11BQ9BPW5 248 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 THYN1Q9P016 225 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 CDC42EP3Q9UKI2 254 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 KIR2DL5BA0A0G2JN68 375 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 KIR2DL5BA0A0G2JPC4 375 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 NDUFS8O00217 210 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 TOX4O94842 621 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 CNN1P51911 297 aaKnown RBP10.8□□□□□ -0.68
SMG6-203ENST00000536871 SSBP2P81877 361 aaPredicted RBP10.8□□□□□ -0.68
SMG6-203ENST00000536871 COX19Q49B96 90 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 LDLRAD2Q5SZI1 272 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 GFI1BQ5VTD9 330 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 KIR2DL5AQ8N109 375 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 Q8N6K4 173 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 OR5T1Q8NG75 326 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 SNHG12Q9BXW3 62 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 OSTCQ9NRP0 149 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 TNCP24821 2201 aa10.8□□□□□ -0.68
SMG6-203ENST00000536871 GGTLC3B5MD39 225 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 FCN1O00602 326 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 AMBPP02760 352 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 RPLP1P05386 114 aaKnown RBP10.79□□□□□ -0.68
SMG6-203ENST00000536871 IGLC1P0CG04 106 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 S100A7P31151 101 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 KLRD1Q13241 179 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 CENPWQ5EE01 88 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 OR1B1Q8NGR6 318 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 SGMS2Q8NHU3 365 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 CHRDL1Q9BU40 450 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 IL36BQ9NZH7 164 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 MRPL36Q9P0J6 103 aaKnown RBP10.79□□□□□ -0.68
SMG6-203ENST00000536871 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
SMG6-203ENST00000536871 ISLRO14498 428 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 SNRPCP09234 159 aaKnown RBP10.78□□□□□ -0.68
SMG6-203ENST00000536871 ZNF25P17030 456 aaPredicted RBP10.78□□□□□ -0.68
SMG6-203ENST00000536871 ORM2P19652 201 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 ZFP36P26651 326 aaKnown RBP10.78□□□□□ -0.68
SMG6-203ENST00000536871 LHFPL4Q7Z7J7 247 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 IGFBPL1Q8WX77 278 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 ARPC1AQ92747 370 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 FXYD5Q96DB9 178 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 LMO4P61968 165 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 PRB3Q04118 309 aaPredicted RBP10.78□□□□□ -0.68
SMG6-203ENST00000536871 ACTL10Q5JWF8 245 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 C1orf194Q5T5A4 169 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 TTC9CQ8N5M4 171 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 TMEM18Q96B42 140 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 TMEM208Q9BTX3 173 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 ELOVL1Q9BW60 279 aa10.78□□□□□ -0.68
SMG6-203ENST00000536871 TRBV9A0A0B4J1U6 114 aa10.77□□□□□ -0.69
SMG6-203ENST00000536871 C19orf84I3L1E1 186 aa10.77□□□□□ -0.69
SMG6-203ENST00000536871 TMEM11P17152 192 aa10.77□□□□□ -0.69
SMG6-203ENST00000536871 BPESC1Q9GZL8 116 aa10.77□□□□□ -0.69
SMG6-203ENST00000536871 TRAV5A0A0B4J249 113 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 A0A0U1RQK1 487 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 ZNF320A2RRD8 509 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 K7EIM0 57 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 TOMM40O96008 361 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 NBEAP1P0C6P0 100 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 YPEL3P61236 119 aaPredicted RBP10.76□□□□□ -0.69
SMG6-203ENST00000536871 RPEL1Q2QD12 228 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 ZNF329Q86UD4 541 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 NCBP2LA6PVI3 153 aaKnown RBP10.76□□□□□ -0.69
SMG6-203ENST00000536871 PEX7O00628 323 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 NDUFS7O75251 213 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 IGHV3-48P01763 117 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 HLA-DRB1P01911 266 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 PSG1P11464 419 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 MYCNOSP40205 109 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 CX3CL1P78423 397 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 PDZD11Q5EBL8 140 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 MORN5Q5VZ52 161 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 FAM231DQ6ZW35 169 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 IGF2BP2-AS1Q96M15 143 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 TXN2Q99757 166 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 SPOCK3Q9BQ16 436 aa10.76□□□□□ -0.69
SMG6-203ENST00000536871 IGLV11-55A0A075B6I3 123 aa10.75□□□□□ -0.69
SMG6-203ENST00000536871 PGPEP1LA6NFU8 196 aa10.75□□□□□ -0.69
SMG6-203ENST00000536871 K7EN84 100 aa10.75□□□□□ -0.69
SMG6-203ENST00000536871 G0S2P27469 103 aa10.75□□□□□ -0.69
SMG6-203ENST00000536871 MFAP4P55083 255 aa10.75□□□□□ -0.69
SMG6-203ENST00000536871 C5orf17Q8NAS9 161 aa10.75□□□□□ -0.69
SMG6-203ENST00000536871 TBX15Q96SF7 602 aa10.75□□□□□ -0.69
SMG6-203ENST00000536871 MRPL27Q9P0M9 148 aaKnown RBP10.75□□□□□ -0.69
SMG6-203ENST00000536871 APELAP0DMC3 54 aa10.74□□□□□ -0.69
SMG6-203ENST00000536871 PYYP10082 97 aa10.74□□□□□ -0.69
SMG6-203ENST00000536871 HIST1H1EP10412 219 aaKnown RBP10.74□□□□□ -0.69
SMG6-203ENST00000536871 GP9P14770 177 aa10.74□□□□□ -0.69
SMG6-203ENST00000536871 FCGR2BP31994 310 aaPredicted RBP10.74□□□□□ -0.69
SMG6-203ENST00000536871 LYZP61626 148 aa10.74□□□□□ -0.69
SMG6-203ENST00000536871 RANP62826 216 aaKnown RBP10.74□□□□□ -0.69
SMG6-203ENST00000536871 TMEM183BQ1AE95 376 aa10.74□□□□□ -0.69
SMG6-203ENST00000536871 LYPD1Q8N2G4 141 aa10.74□□□□□ -0.69
SMG6-203ENST00000536871 EPDR1Q9UM22 224 aa10.74□□□□□ -0.69
SMG6-203ENST00000536871 IGKV1-17P01599 117 aa10.74□□□□□ -0.69
SMG6-203ENST00000536871 MT-ND6P03923 174 aa10.74□□□□□ -0.69
SMG6-203ENST00000536871 UBE2G1P62253 170 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms