RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 NDUFA4O00483 81 aa13.4□□□□□ -0.26
TNFRSF1A-209ENST00000536717 CTSGP08311 255 aa13.4□□□□□ -0.26
TNFRSF1A-209ENST00000536717 SULT1A1P50225 295 aa13.4□□□□□ -0.26
TNFRSF1A-209ENST00000536717 HAGHQ16775 308 aa13.4□□□□□ -0.26
TNFRSF1A-209ENST00000536717 CHAC2Q8WUX2 184 aa13.4□□□□□ -0.26
TNFRSF1A-209ENST00000536717 MRPL36Q9P0J6 103 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-209ENST00000536717 TRAV30A0A087WSZ9 112 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 CCNKO75909 580 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 CST7O76096 145 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 GAMTQ14353 236 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 LINC00322Q6ZN03 302 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 ACOT7LQ6ZUV0 252 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 DEFB125Q8N687 156 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 NPIPB3Q92617 1050 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 DAZ1Q9NQZ3 744 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 IGHV3OR16-8A0A075B7F1 116 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 TRAV14DV4A0A0A6YYC5 116 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 IGSF23A1L1A6 192 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 LYL1P12980 280 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 HBG1P69891 147 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 HBG2P69892 147 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 RELQ04864 619 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 TMEM217Q8N7C4 229 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 GGACTQ9BVM4 153 aa13.39□□□□□ -0.27
TNFRSF1A-209ENST00000536717 OR11H12B2RN74 326 aa13.38□□□□□ -0.27
TNFRSF1A-209ENST00000536717 DLK1P80370 383 aa13.38□□□□□ -0.27
TNFRSF1A-209ENST00000536717 AKR1C1Q04828 323 aa13.38□□□□□ -0.27
TNFRSF1A-209ENST00000536717 BAXQ07812 192 aa13.38□□□□□ -0.27
TNFRSF1A-209ENST00000536717 C20orf24Q9BUV8 137 aa13.38□□□□□ -0.27
TNFRSF1A-209ENST00000536717 TRAV25A0A0B4J276 109 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 SMCO3A2RU48 225 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 FNDC10F2Z333 226 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 OR10J1P30954 320 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 S100A11P31949 105 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 EWSR1Q01844 656 aaKnown RBP eCLIP13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 SLC38A11Q08AI6 406 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 ARL16Q0P5N6 197 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 Q5BKY6 102 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 LILRB2Q8N423 598 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 OR1S2Q8NGQ3 325 aa13.37□□□□□ -0.27
TNFRSF1A-209ENST00000536717 RYR3Q15413 4870 aa13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 CSMD3Q7Z407 3707 aa13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 RBMY1BA6NDE4 496 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 RBMY1EA6NEQ0 496 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 ZFP92A6NM28 416 aa13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 K7EMT4 169 aa13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 ZNF207O43670 478 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 RBMY1DP0C7P1 496 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 IGLC1P0CG04 106 aa13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 RPL12P30050 165 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 NUP62P37198 522 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 SPATA25Q9BR10 227 aa13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 SRD5A3Q9H8P0 318 aa13.36□□□□□ -0.27
TNFRSF1A-209ENST00000536717 STARD9Q9P2P6 4700 aa13.35□□□□□ -0.27
TNFRSF1A-209ENST00000536717 NHLH2Q02577 135 aa13.35□□□□□ -0.27
TNFRSF1A-209ENST00000536717 ZNF600Q6ZNG1 722 aa13.35□□□□□ -0.27
TNFRSF1A-209ENST00000536717 RBPMS2Q6ZRY4 209 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-209ENST00000536717 TMEM144Q7Z5S9 345 aa13.35□□□□□ -0.27
TNFRSF1A-209ENST00000536717 NPVFQ9HCQ7 196 aa13.35□□□□□ -0.27
TNFRSF1A-209ENST00000536717 FXYD6-FXYD2A0A087WZ82 144 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 IGKV1-17P01599 117 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 ATP6V1FQ16864 119 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 TIGITQ495A1 244 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 CITED4Q96RK1 184 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 TSPAN4O14817 238 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 YIF1AO95070 293 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 FABP1P07148 127 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 YPEL3P61236 119 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 ZNF546Q86UE3 836 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 THAP8Q8NA92 274 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 INO80EQ8NBZ0 244 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 OR5C1Q8NGR4 320 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 SPAG8Q99932 426 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 EDA2RQ9HAV5 297 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 UQCC1Q9NVA1 299 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
TNFRSF1A-209ENST00000536717 G3V3Q6 166 aa13.33□□□□□ -0.28
TNFRSF1A-209ENST00000536717 C3orf84H3BNL1 204 aa13.33□□□□□ -0.28
TNFRSF1A-209ENST00000536717 AKAP14Q86UN6 197 aa13.33□□□□□ -0.28
TNFRSF1A-209ENST00000536717 MUC7Q8TAX7 377 aa13.33□□□□□ -0.28
TNFRSF1A-209ENST00000536717 Q8WTZ3 238 aa13.33□□□□□ -0.28
TNFRSF1A-209ENST00000536717 TRGV9Q99603 122 aa13.33□□□□□ -0.28
TNFRSF1A-209ENST00000536717 TMEM147Q9BVK8 224 aa13.33□□□□□ -0.28
TNFRSF1A-209ENST00000536717 SMPXQ9UHP9 88 aa13.33□□□□□ -0.28
TNFRSF1A-209ENST00000536717 PUS1Q9Y606 427 aaKnown RBP eCLIP13.33□□□□□ -0.28
TNFRSF1A-209ENST00000536717 DYNC2H1Q8NCM8 4307 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-209ENST00000536717 IGKV1D-37A0A075B6S9 117 aa13.32□□□□□ -0.28
TNFRSF1A-209ENST00000536717 IGKV1OR2-108A0A075B7D4 117 aa13.32□□□□□ -0.28
TNFRSF1A-209ENST00000536717 SMLR1H3BR10 107 aa13.32□□□□□ -0.28
TNFRSF1A-209ENST00000536717 RD3LP0DJH9 198 aa13.32□□□□□ -0.28
TNFRSF1A-209ENST00000536717 TEPPQ6URK8 271 aa13.32□□□□□ -0.28
TNFRSF1A-209ENST00000536717 ST6GAL2Q96JF0 529 aa13.32□□□□□ -0.28
TNFRSF1A-209ENST00000536717 AQP10Q96PS8 301 aa13.32□□□□□ -0.28
TNFRSF1A-209ENST00000536717 RETNQ9HD89 108 aa13.32□□□□□ -0.28
TNFRSF1A-209ENST00000536717 IGHV7-4-1A0A0J9YVY3 117 aa13.31□□□□□ -0.28
TNFRSF1A-209ENST00000536717 UBE2L5PA0A1B0GUS4 154 aa13.31□□□□□ -0.28
TNFRSF1A-209ENST00000536717 TOMM40O96008 361 aa13.31□□□□□ -0.28
TNFRSF1A-209ENST00000536717 CLINT1Q14677 625 aa13.31□□□□□ -0.28
TNFRSF1A-209ENST00000536717 VWC2Q2TAL6 325 aa13.31□□□□□ -0.28
TNFRSF1A-209ENST00000536717 CHEK1O14757 476 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms