RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ZFP1Q6P2D0 407 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 GPHB5Q86YW7 130 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 APRG1Q8IVJ8 170 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 FAM223AQ8IWN6 122 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 Q8NAQ8 132 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 OR13F1Q8NGS4 319 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 CD300LFQ8TDQ1 290 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 IL1F10Q8WWZ1 152 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 C9orf85Q96MD7 179 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 PHB2Q99623 299 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 RNF5Q99942 180 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 PDCD1LG2Q9BQ51 273 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 AGMATQ9BSE5 352 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 CHRDL1Q9BU40 450 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 SLC5A7Q9GZV3 580 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 METTL9Q9H1A3 318 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 PIPOXQ9P0Z9 390 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 WARS2Q9UGM6 360 aaKnown RBP3.54□□□□□ -1.84
CLIP1-207ENST00000536634 PEX16Q9Y5Y5 336 aa3.54□□□□□ -1.84
CLIP1-207ENST00000536634 A0A087WXM4 84 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 TRAV10A0A0B4J240 114 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 TRAV25A0A0B4J276 109 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 MFSD2BA6NFX1 497 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 J3QLW9 94 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 GNGT2O14610 69 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 ZNF780AO75290 641 aaPredicted RBP3.53□□□□□ -1.84
CLIP1-207ENST00000536634 GPX5O75715 221 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 SCO1O75880 301 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 PTTG1O95997 202 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 APOA1P02647 267 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 S100A8P05109 93 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 GNAO1P09471 354 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 C8orf88P0DMB2 117 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 P0DMU3 169 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 FAM231AP0DMU4 169 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 FAM231CP0DMU5 169 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 CT45A10P0DMU9 189 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 GTF2F2P13984 249 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 ZNF93P35789 620 aaPredicted RBP3.53□□□□□ -1.84
CLIP1-207ENST00000536634 TMBIM6P55061 237 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 HMGN3Q15651 99 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 C10orf55Q5SWW7 151 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 SLC25A24Q6NUK1 477 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 CLEC19AQ6UXS0 136 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 DHFR2Q86XF0 187 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 PDPNQ86YL7 162 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 CEND1Q8N111 149 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.53□□□□□ -1.84
CLIP1-207ENST00000536634 ZFAND1Q8TCF1 268 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 CANT1Q8WVQ1 401 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 PYDC1Q8WXC3 89 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 SRSF12Q8WXF0 261 aaKnown RBP3.53□□□□□ -1.84
CLIP1-207ENST00000536634 GALMQ96C23 342 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 GALNT14Q96FL9 552 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 CPNE2Q96FN4 548 aaPredicted RBP3.53□□□□□ -1.84
CLIP1-207ENST00000536634 C4orf36Q96KX1 117 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 SULT4A1Q9BR01 284 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 RNF126Q9BV68 326 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 SAV1Q9H4B6 383 aaPredicted RBP3.53□□□□□ -1.84
CLIP1-207ENST00000536634 BANF2Q9H503 90 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 ISG20L2Q9H9L3 353 aaKnown RBP3.53□□□□□ -1.84
CLIP1-207ENST00000536634 KCNIP1Q9NZI2 227 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 CCDC59Q9P031 241 aaKnown RBP3.53□□□□□ -1.84
CLIP1-207ENST00000536634 OR1A1Q9P1Q5 309 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 RNF213Q63HN8 5207 aa3.53□□□□□ -1.84
CLIP1-207ENST00000536634 LRP2P98164 4655 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 SLC22A5O76082 557 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 RAB3DO95716 219 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 CA1P00915 261 aaPredicted RBP3.52□□□□□ -1.85
CLIP1-207ENST00000536634 MBP02144 154 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 CD74P04233 296 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 OR4E1P0C645 316 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 MGMTP16455 207 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 POLR2IP36954 125 aaKnown RBP3.52□□□□□ -1.85
CLIP1-207ENST00000536634 RPL35P42766 123 aaKnown RBP3.52□□□□□ -1.85
CLIP1-207ENST00000536634 IFITM3Q01628 133 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 TNXAQ16473 311 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 PRSS8Q16651 343 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 C1orf134Q5TEV5 83 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 ATRAIDQ6UW56 229 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 TPRA1Q86W33 373 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 NECAP1Q8NC96 275 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 OR4A5Q8NH83 315 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 RNASE11Q8TAA1 199 aaKnown RBP3.52□□□□□ -1.85
CLIP1-207ENST00000536634 CCDC124Q96CT7 223 aaKnown RBP3.52□□□□□ -1.85
CLIP1-207ENST00000536634 C5orf30Q96GV9 206 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 DCUN1D5Q9BTE7 237 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 PRRG3Q9BZD7 231 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 SELENOIQ9C0D9 397 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 BIN3Q9NQY0 253 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 SLC35D1Q9NTN3 355 aa3.52□□□□□ -1.85
CLIP1-207ENST00000536634 EXOSC1Q9Y3B2 195 aaKnown RBP3.52□□□□□ -1.85
CLIP1-207ENST00000536634 DEFB131BA0A096LNP1 70 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 LOC100506127A0A0U1RQW1 187 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 A0A1B0GV90 55 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 A0A1B0GW64 132 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 DAPL1A0PJW8 107 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 C9orf170A2RU37 121 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 TMEM212A6NML5 194 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 M0R1X1 148 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms