RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ODF3L2Q3SX64 289 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 ETFRF1Q6IPR1 90 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 LINC00476Q8WZB0 136 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 OVOL2Q9BRP0 275 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 PRR13Q9NZ81 148 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 PUS1Q9Y606 427 aaKnown RBP eCLIP9.23□□□□□ -0.93
PRKDC-207ENST00000536483 KMT2AQ03164 3969 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 IGHV3OR16-8A0A075B7F1 116 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 ZNF207O43670 478 aaKnown RBP9.22□□□□□ -0.93
PRKDC-207ENST00000536483 LY6G6CO95867 125 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 IGLC1P0CG04 106 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 NPY1RP25929 384 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 DHRS2Q13268 280 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 PPP1R1AQ13522 171 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 TMED4Q7Z7H5 227 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 OR1S2Q8NGQ3 325 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 DTD1Q8TEA8 209 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 GGTLC1Q9BX51 225 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 U3KQE9 123 aa9.22□□□□□ -0.93
PRKDC-207ENST00000536483 LOC102724200A0A096LPH7 203 aaPredicted RBP9.21□□□□□ -0.94
PRKDC-207ENST00000536483 KIR2DL5BA0A0G2JN68 375 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 KIR2DL5BA0A0G2JPC4 375 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 C9orf170A2RU37 121 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 IFNA7P01567 189 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 GPX4P36969 197 aaPredicted RBP9.21□□□□□ -0.94
PRKDC-207ENST00000536483 PMS2P11Q13670 270 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 KIR2DL5AQ8N109 375 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 LILRB2Q8N423 598 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 KIR2DL5BQ8NHK3 375 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 COQ8AQ8NI60 647 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 RBKSQ9H477 322 aa9.21□□□□□ -0.94
PRKDC-207ENST00000536483 A0A1W2PS18 150 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 CXorf65A6NEN9 183 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 G3V3Q6 166 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 UBE2CO00762 179 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 NXPH3O95157 252 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 NPPCP23582 126 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 VAMP1P23763 118 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 LGALSLQ3ZCW2 172 aaPredicted RBP9.2□□□□□ -0.94
PRKDC-207ENST00000536483 Q5BKY6 102 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 Q6ZWC4 215 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 WFDC3Q8IUB2 231 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 OR11H4Q8NGC9 324 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 ST8SIA2Q92186 375 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 TMEM231Q9H6L2 316 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 TP53TG1Q9Y2A0 90 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
PRKDC-207ENST00000536483 A0A0D9SG52 128 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 SMLR1H3BR10 107 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 L7N2F9 121 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 GOSR2O14653 212 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 DFFBO76075 338 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 IFNA10P01566 189 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 APOHP02749 345 aaPredicted RBP9.19□□□□□ -0.94
PRKDC-207ENST00000536483 OR10J1P30954 320 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 RND2P52198 227 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 PAFAH1B2P68402 229 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 EWSR1Q01844 656 aaKnown RBP eCLIP9.19□□□□□ -0.94
PRKDC-207ENST00000536483 ID3Q02535 119 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 TIGITQ495A1 244 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 TEX261Q6UWH6 196 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 TCF24Q7RTU0 167 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 OR1S1Q8NH92 325 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 Q8WTZ3 238 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 NPIPB3Q92617 1050 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 CIB3Q96Q77 187 aaPredicted RBP9.19□□□□□ -0.94
PRKDC-207ENST00000536483 METTL26Q96S19 204 aa9.19□□□□□ -0.94
PRKDC-207ENST00000536483 A0A0J9YWU9 116 aa9.18□□□□□ -0.94
PRKDC-207ENST00000536483 MED6O75586 246 aa9.18□□□□□ -0.94
PRKDC-207ENST00000536483 TOMM40O96008 361 aa9.18□□□□□ -0.94
PRKDC-207ENST00000536483 H2BFSP57053 126 aa9.18□□□□□ -0.94
PRKDC-207ENST00000536483 ZNF345Q14585 488 aa9.18□□□□□ -0.94
PRKDC-207ENST00000536483 KRTAP17-1Q9BYP8 105 aa9.18□□□□□ -0.94
PRKDC-207ENST00000536483 NMES1Q9C002 83 aa9.18□□□□□ -0.94
PRKDC-207ENST00000536483 IGHV3-49A0A0A0MS15 119 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 PRSS46E5RG02 174 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 SYNGR2O43760 224 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 S100A11P31949 105 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 APOC4P55056 127 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 OR2F1Q13607 317 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 GAMTQ14353 236 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 OPCMLQ14982 345 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 GGNBP1Q5YKI7 109 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 GSG1LQ6UXU4 331 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 ZNF680Q8NEM1 530 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 GRAMD2BQ96HH9 432 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 MS4A6AQ9H2W1 248 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 MAP6D1Q9H9H5 199 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 HERC2O95714 4834 aa9.17□□□□□ -0.94
PRKDC-207ENST00000536483 DNAH10Q8IVF4 4471 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 IGKV1D-37A0A075B6S9 117 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 IGHV3OR16-13A0A075B7E8 117 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 IGHV3-74A0A0B4J1X5 117 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 NUPR2A6NF83 97 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 IFNA4P05014 189 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 RD3LP0DJH9 198 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 RAB14P61106 215 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 RAB11AP62491 216 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 RPP30P78346 268 aaKnown RBP9.16□□□□□ -0.94
PRKDC-207ENST00000536483 CEMP1Q6PRD7 247 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms