RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RPL7P18124 248 aaKnown RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 EVI2AP22794 236 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 GCHFRP30047 84 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 GPR12P47775 334 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CLRN1P58418 232 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CT45A1Q5HYN5 189 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 MEIG1Q5JSS6 88 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 KLF17Q5JT82 389 aaPredicted RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 TEPPQ6URK8 271 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 TMEM14EPQ6UXP3 125 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 Q6ZS46 218 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 MOB3BQ86TA1 216 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 VKORC1L1Q8N0U8 176 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CT45A3Q8NHU0 189 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 SAP25Q8TEE9 199 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 TMEM147Q9BVK8 224 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 FAM234AQ9H0X4 552 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 MS4A6AQ9H2W1 248 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 OBP2BQ9NPH6 170 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 DKK2Q9UBU2 259 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 ZNF391Q9UJN7 358 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CACNA1EQ15878 2313 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 TET2Q6N021 2002 aaPredicted RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 A0A1W2PPC4 97 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 SMIM27A0A1W2PRY6 76 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 IZUMO1RA6ND01 250 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 GAGE12JA6NER3 117 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 LRRC30A6NM36 301 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 IGLL5B9A064 214 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 F8W735 103 aaPredicted RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 H0Y8X5 98 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 H3BVH4 76 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 CRXO43186 299 aaPredicted RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 GAGE7O76087 117 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 IGHV3-13P01766 116 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 TFF1P04155 84 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 GAGE12FP0CL80 117 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 GAGE12GP0CL81 117 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 GAGE12IP0CL82 117 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 LINC00694P0DN24 101 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 NXPH1P58417 271 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 GRB2P62993 217 aaKnown RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 GAGE4Q13068 117 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 ZFAND6Q6FIF0 208 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 TUSC5Q8IXB3 177 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 TTC9CQ8N5M4 171 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 TEX29Q8N6K0 151 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 PHLDA1Q8WV24 401 aaPredicted RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 DPF1Q92782 380 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 CCDC140Q96MF4 163 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 MGST2Q99735 147 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 PRO0461Q9UI25 63 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 SPTBN4Q9H254 2564 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 SDK2Q58EX2 2172 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 CEP250Q9BV73 2442 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 PRR14LQ5THK1 2151 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 KIR2DS5A0A0G2JLQ3 304 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 A0A0G2JNG1 304 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 GGTLC3B5MD39 225 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 FNDC10F2Z333 226 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 H3BTX0 84 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 IGLV1-40P01703 118 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 RPL30P62888 115 aaKnown RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 GNG5P63218 68 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 KIR2DS5Q14953 304 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 LINC00322Q6ZN03 302 aaPredicted RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 ZFP2Q6ZN57 461 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 ABHD12Q8N2K0 398 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 OR4A16Q8NH70 328 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 TSACCQ96A04 125 aaPredicted RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 BORCS8Q96FH0 119 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 ADTRPQ96IZ2 230 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 TRIB1Q96RU8 372 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 UBTD1Q9HAC8 227 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 F8W1H4 67 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 ZNF561-AS1K7EIQ3 104 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 MGST3O14880 152 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 DHHO43323 396 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 DHRS3O75911 302 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 APOHP02749 345 aaPredicted RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 CLPSP04118 112 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 MYOD1P15172 320 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 NDUFV3P56181 108 aaKnown RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 CST6Q15828 149 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 LPAL2Q16609 132 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 ZNF542PQ5EBM4 170 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 MORN5Q5VZ52 161 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 H2BFWTQ7Z2G1 175 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 NT5CQ8TCD5 201 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.02□□□□□ -1.93
MCF2-210ENST00000536274 TM4SF19Q96DZ7 209 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 GRAMD2BQ96HH9 432 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 COX14Q96I36 57 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 CHCHD5Q9BSY4 110 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 NGBQ9NPG2 151 aa3.02□□□□□ -1.93
MCF2-210ENST00000536274 IGHV3-20A0A0C4DH32 117 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 EFNA2O43921 213 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 SLC25A5P05141 298 aaKnown RBP3.01□□□□□ -1.93
MCF2-210ENST00000536274 OPRK1P41145 380 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 PSMB2P49721 201 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms