RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PSG11Q9UQ72 335 aa11.39□□□□□ -0.59
LIG1-203ENST00000536218 SERTM2A0A1B0GWG4 89 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 H3BRM9 83 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 ZNF138P52744 262 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 TIMM23BQ5SRD1 257 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 MOGAT3Q86VF5 341 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 OR2V2Q96R30 315 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 GGTLC1Q9BX51 225 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 OPRK1P41145 380 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 EFNB3Q15768 340 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 C11orf52Q96A22 123 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 HEYLQ9NQ87 328 aaPredicted RBP11.38□□□□□ -0.59
LIG1-203ENST00000536218 MBNL3Q9NUK0 354 aaKnown RBP11.38□□□□□ -0.59
LIG1-203ENST00000536218 SPTBN4Q9H254 2564 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 A0A1W2PRE2 83 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 C17orf98A8MV24 154 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 MBNL2Q5VZF2 373 aaKnown RBP11.38□□□□□ -0.59
LIG1-203ENST00000536218 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 CD177Q8N6Q3 437 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 DEFB108BQ8NET1 73 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 OR13A1Q8NGR1 328 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 BLNKQ8WV28 456 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 URB1-AS1Q96HZ7 61 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 COL25A1Q9BXS0 654 aaPredicted RBP11.38□□□□□ -0.59
LIG1-203ENST00000536218 BSNQ9UPA5 3926 aa11.38□□□□□ -0.59
LIG1-203ENST00000536218 HLA-DRB1P01911 266 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 PRDX2P32119 198 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 PRR30Q53SZ7 412 aaPredicted RBP11.37□□□□□ -0.59
LIG1-203ENST00000536218 FAM120AOSQ5T036 256 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 FAM57AQ8TBR7 257 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 SMIM17P0DL12 118 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 FABP2P12104 132 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 RAB31Q13636 194 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 CD300EQ496F6 205 aaPredicted RBP11.37□□□□□ -0.59
LIG1-203ENST00000536218 MIR17HGQ75NE6 70 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 ZNRF1Q8ND25 227 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 NUP35Q8NFH5 326 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 LINC00479Q96M42 142 aa11.37□□□□□ -0.59
LIG1-203ENST00000536218 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.36□□□□□ -0.59
LIG1-203ENST00000536218 PRRG2O14669 202 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 CSN3P07498 182 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 IGFBP2P18065 325 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 ITLN1Q8WWA0 313 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 GEMIN7Q9H840 131 aaKnown RBP11.36□□□□□ -0.59
LIG1-203ENST00000536218 PSMB11A5LHX3 300 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 COX8AP10176 69 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 KLF5Q13887 457 aaPredicted RBP11.36□□□□□ -0.59
LIG1-203ENST00000536218 GFRALQ6UXV0 394 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 RABAC1Q9UI14 185 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 A0A1W2PPM0 123 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 ATRXP46100 2492 aa11.36□□□□□ -0.59
LIG1-203ENST00000536218 OOEPA6NGQ2 149 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 ZCCHC24Q8N2G6 241 aaKnown RBP11.35□□□□□ -0.59
LIG1-203ENST00000536218 FAM222BQ8WU58 562 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 MS4A6AQ9H2W1 248 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 CRXO43186 299 aaPredicted RBP11.35□□□□□ -0.59
LIG1-203ENST00000536218 ZNF137PP52743 207 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 SLC35E4Q6ICL7 350 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 ADAMTSL5Q6ZMM2 481 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 ABHD12Q8N2K0 398 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 GCSAMQ8N6F7 178 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 TEX45Q8NA69 505 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 FAM216AQ8WUB2 273 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 RELNP78509 3460 aa11.35□□□□□ -0.59
LIG1-203ENST00000536218 IGKV1D-17A0A075B6S4 117 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 A0A0G2JNJ9 132 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 HIGD1CA8MV81 97 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 FAM87AP0C7U9 286 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 GLRXP35754 106 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 FAM234AQ9H0X4 552 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 Q9UFV3 132 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 PSG3Q16557 428 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 NEU4Q8WWR8 484 aaPredicted RBP11.34□□□□□ -0.59
LIG1-203ENST00000536218 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 NPIPB11E5RHQ5 1161 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 MPDU1O75352 247 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 Q8NA96 180 aa11.34□□□□□ -0.59
LIG1-203ENST00000536218 REG1BP48304 166 aa11.33□□□□□ -0.6
LIG1-203ENST00000536218 HSD17B10Q99714 261 aaKnown RBP11.33□□□□□ -0.6
LIG1-203ENST00000536218 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
LIG1-203ENST00000536218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.33□□□□□ -0.6
LIG1-203ENST00000536218 IGLV2-8P01709 118 aa11.33□□□□□ -0.6
LIG1-203ENST00000536218 CATR1Q13166 79 aa11.33□□□□□ -0.6
LIG1-203ENST00000536218 H1FXQ92522 213 aaKnown RBP11.33□□□□□ -0.6
LIG1-203ENST00000536218 SNRNP40Q96DI7 357 aaKnown RBP11.33□□□□□ -0.6
LIG1-203ENST00000536218 C5orf30Q96GV9 206 aa11.33□□□□□ -0.6
LIG1-203ENST00000536218 C19orf24Q9BVV8 132 aa11.33□□□□□ -0.6
LIG1-203ENST00000536218 AREGP15514 252 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 CD40P25942 277 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 RTL8BQ17RB0 113 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 SAMD5Q5TGI4 173 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 DUX4L9Q6RFH8 374 aaPredicted RBP11.32□□□□□ -0.6
LIG1-203ENST00000536218 LEAP2Q969E1 77 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 F11RQ9Y624 299 aaKnown RBP11.32□□□□□ -0.6
LIG1-203ENST00000536218 COL6A6A6NMZ7 2263 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 SRRM5B3KS81 715 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 GGTLC3B5MD39 225 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms