RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.742e-7■■■■□ 21.9
SPG11-203ENST00000535302 TRAV8-1A0A0A6YYK1 113 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 TRAV13-1A0A0B4J241 112 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 DEFB130BP0DP73 79 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 DEFB130AP0DP74 79 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 IGFBP3P17936 291 aaPredicted RBP10.45□□□□□ -0.74
SPG11-203ENST00000535302 KLF17Q5JT82 389 aaPredicted RBP10.45□□□□□ -0.74
SPG11-203ENST00000535302 VMO1Q7Z5L0 202 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 SLC25A28Q96A46 364 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 GSN-AS1Q9NRJ2 163 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 IGKCP01834 107 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 SRP19P09132 144 aaKnown RBP10.45□□□□□ -0.74
SPG11-203ENST00000535302 UCP1P25874 307 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 ZNF497Q6ZNH5 498 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 PHF3Q92576 2039 aaKnown RBP10.45□□□□□ -0.74
SPG11-203ENST00000535302 MRAPQ8TCY5 172 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 IGLV3-19P01714 112 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 CLPSP04118 112 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 MYOD1P15172 320 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 A0A087WWL8 130 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 TMEM30BQ3MIR4 351 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 TRAV8-3A0A0A6YYJ7 113 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 RNF222A6NCQ9 220 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 A8MXK9 166 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 EFNA2O43921 213 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 ZNF876PQ49A33 203 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 Q8TAT8 98 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 RFNGQ9Y644 331 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 J3QW42 95 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.44□□□□□ -0.74
SPG11-203ENST00000535302 PAX8Q06710 450 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 RNF125Q96EQ8 232 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 DOCK6Q96HP0 2047 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 C5orf63A6NC05 138 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 RPL23P62829 140 aaKnown RBP10.44□□□□□ -0.74
SPG11-203ENST00000535302 Q0VFX4 171 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
SPG11-203ENST00000535302 TRBV6-7A0A0A0MS04 114 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 ZNF114Q8NC26 417 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 A0A096LPF7 62 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 PMS2P5A8MQ11 134 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 hDV102S1A0JD36 115 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 CIARTQ8N365 385 aaPredicted RBP10.43□□□□□ -0.74
SPG11-203ENST00000535302 TMEM86BQ8N661 226 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 WFDC1Q9HC57 220 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 EPDR1Q9UM22 224 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 PSG8Q9UQ74 426 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 CEP250Q9BV73 2442 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 ESDP10768 282 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 LINC00205P59089 165 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 GAGE2EQ4V326 116 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 C1orf159Q96HA4 380 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 GAGE2DQ9UEU5 116 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 LYPD3O95274 346 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 SPATA31B1PQ5VZV4 182 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 PRADC1Q9BSG0 188 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 CYSLTR1Q9Y271 337 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 SDK2Q58EX2 2172 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 C15orf61A6NNL5 157 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 NAPSAO96009 420 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 PRDM13Q9H4Q3 707 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 CEP290O15078 2479 aa10.43□□□□□ -0.74
SPG11-203ENST00000535302 CGB7P0DN87 165 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 ZFP36L1Q07352 338 aaKnown RBP10.42□□□□□ -0.74
SPG11-203ENST00000535302 MBNL3Q9NUK0 354 aaKnown RBP10.42□□□□□ -0.74
SPG11-203ENST00000535302 MYO7BQ6PIF6 2116 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 LILRA1O75019 489 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 OTORQ9NRC9 128 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 ITGB1BP1O14713 200 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 TNFRSF6BO95407 300 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 KLHL30-AS1Q8NEE0 82 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 NYNRINQ9P2P1 1898 aaKnown RBP10.42□□□□□ -0.74
SPG11-203ENST00000535302 F8VVB4 439 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 F8VWA3 439 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 GFI1Q99684 422 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 RNF126Q9BV68 326 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 CA7P43166 264 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 ZNF138P52744 262 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 SAMD5Q5TGI4 173 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 RNF144BQ7Z419 303 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 ERG28Q9UKR5 140 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 IGKV1-12A0A0C4DH73 117 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 IGKV1D-12P01611 117 aa10.42□□□□□ -0.74
SPG11-203ENST00000535302 BTCP35070 178 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 HAPLN4Q86UW8 402 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 TET1Q8NFU7 2136 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 LRRK1Q38SD2 2015 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 A0A087X0K7 114 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 PLNP26678 52 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 ZNF581Q9P0T4 197 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 KNCNA6PVL3 124 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 CCL20P78556 96 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 ZNF672Q499Z4 452 aaPredicted RBP10.41□□□□□ -0.74
SPG11-203ENST00000535302 OCC1Q8TAD7 63 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 LAMTOR2Q9Y2Q5 125 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 SCN10AQ9Y5Y9 1956 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 CLPSL2Q6UWE3 100 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 FREM3P0C091 2139 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 ERCC8Q13216 396 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms