RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 IFNA4P05014 189 aa13.68□□□□□ -0.22
NDUFS3-213ENST00000534716 C4BPBP20851 252 aa13.68□□□□□ -0.22
NDUFS3-213ENST00000534716 TCTAP57738 103 aa13.68□□□□□ -0.22
NDUFS3-213ENST00000534716 AP3S2P59780 193 aa13.68□□□□□ -0.22
NDUFS3-213ENST00000534716 TMEM128Q5BJH2 165 aa13.68□□□□□ -0.22
NDUFS3-213ENST00000534716 LRTM2Q8N967 370 aa13.68□□□□□ -0.22
NDUFS3-213ENST00000534716 CSNK1G2-AS1Q8NCQ2 148 aa13.68□□□□□ -0.22
NDUFS3-213ENST00000534716 RAB40CQ96S21 281 aa13.68□□□□□ -0.22
NDUFS3-213ENST00000534716 NRN1Q9NPD7 142 aa13.68□□□□□ -0.22
NDUFS3-213ENST00000534716 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
NDUFS3-213ENST00000534716 SLC25A6P12236 298 aa13.67□□□□□ -0.22
NDUFS3-213ENST00000534716 MIFP14174 115 aa13.67□□□□□ -0.22
NDUFS3-213ENST00000534716 NUP62P37198 522 aaPredicted RBP13.67□□□□□ -0.22
NDUFS3-213ENST00000534716 ACTL10Q5JWF8 245 aa13.67□□□□□ -0.22
NDUFS3-213ENST00000534716 SIGLEC15Q6ZMC9 328 aa13.67□□□□□ -0.22
NDUFS3-213ENST00000534716 OR51G1Q8NGK1 321 aa13.67□□□□□ -0.22
NDUFS3-213ENST00000534716 V9GYH0 126 aa13.67□□□□□ -0.22
NDUFS3-213ENST00000534716 DNAH6Q9C0G6 4158 aa13.67□□□□□ -0.22
NDUFS3-213ENST00000534716 DEFB4AO15263 64 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 RBMY1A1P0DJD3 496 aaKnown RBP13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 RBMY1CP0DJD4 496 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 SNRPD3P62318 126 aaKnown RBP13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 GAMTQ14353 236 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 RBMY1FQ15415 496 aaKnown RBP13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 PSMG4Q5JS54 123 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 OR8G2PQ6IF36 304 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 TOMM5Q8N4H5 51 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 OR1S1Q8NH92 325 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 C2CD4CQ8TF44 421 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 RNF125Q96EQ8 232 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 SLC25A21Q9BQT8 299 aaPredicted RBP13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 FBXL17Q9UF56 701 aa13.66□□□□□ -0.22
NDUFS3-213ENST00000534716 IGKV1D-37A0A075B6S9 117 aa13.65□□□□□ -0.22
NDUFS3-213ENST00000534716 IGHV4-28A0A0C4DH34 117 aa13.65□□□□□ -0.22
NDUFS3-213ENST00000534716 C11orf94C9JXX5 98 aa13.65□□□□□ -0.22
NDUFS3-213ENST00000534716 PFDN2Q9UHV9 154 aa13.65□□□□□ -0.22
NDUFS3-213ENST00000534716 X6R8D5 127 aa13.65□□□□□ -0.22
NDUFS3-213ENST00000534716 PYDC2Q56P42 97 aa13.64□□□□□ -0.23
NDUFS3-213ENST00000534716 ZFP92A6NM28 416 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 H3BMM0 161 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 NKX2-1P43699 371 aaPredicted RBP13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 NUTF2P61970 127 aaKnown RBP13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 ZNF90Q03938 601 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 ZNF79Q15937 498 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 C1orf194Q5T5A4 169 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 TMED4Q7Z7H5 227 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 CCDC190Q86UF4 302 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 RPP25LQ8N5L8 163 aaKnown RBP13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 SLC35E1Q96K37 410 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 C1QTNF4Q9BXJ3 329 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 TBC1D24Q9ULP9 559 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 HECTD4Q9Y4D8 3996 aa13.63□□□□□ -0.23
NDUFS3-213ENST00000534716 FABP1P07148 127 aa13.62□□□□□ -0.23
NDUFS3-213ENST00000534716 RAB11AP62491 216 aa13.62□□□□□ -0.23
NDUFS3-213ENST00000534716 MED6O75586 246 aa13.61□□□□□ -0.23
NDUFS3-213ENST00000534716 SFT2D2O95562 160 aa13.61□□□□□ -0.23
NDUFS3-213ENST00000534716 HLA-DRB4P13762 266 aa13.61□□□□□ -0.23
NDUFS3-213ENST00000534716 S100A5P33763 92 aa13.61□□□□□ -0.23
NDUFS3-213ENST00000534716 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
NDUFS3-213ENST00000534716 TRGV9Q99603 122 aa13.61□□□□□ -0.23
NDUFS3-213ENST00000534716 PBDC1Q9BVG4 233 aa13.61□□□□□ -0.23
NDUFS3-213ENST00000534716 CLEC5AQ9NY25 188 aa13.61□□□□□ -0.23
NDUFS3-213ENST00000534716 HLA-DRB4X5D2U9 266 aa13.61□□□□□ -0.23
NDUFS3-213ENST00000534716 ELOA3CA0A087WX78 387 aaPredicted RBP13.6□□□□□ -0.23
NDUFS3-213ENST00000534716 SNRPGP15A8MWD9 76 aa13.6□□□□□ -0.23
NDUFS3-213ENST00000534716 VAMP1P23763 118 aa13.6□□□□□ -0.23
NDUFS3-213ENST00000534716 CIB3Q96Q77 187 aaPredicted RBP13.6□□□□□ -0.23
NDUFS3-213ENST00000534716 APLNQ9ULZ1 77 aa13.6□□□□□ -0.23
NDUFS3-213ENST00000534716 IGKV1OR2-108A0A075B7D4 117 aa13.59□□□□□ -0.23
NDUFS3-213ENST00000534716 PRSS46E5RG02 174 aa13.59□□□□□ -0.23
NDUFS3-213ENST00000534716 DEDDO75618 318 aa13.59□□□□□ -0.23
NDUFS3-213ENST00000534716 HLA-DMBP28068 263 aa13.59□□□□□ -0.23
NDUFS3-213ENST00000534716 UBE2MP61081 183 aaKnown RBP13.59□□□□□ -0.23
NDUFS3-213ENST00000534716 RPP30P78346 268 aaKnown RBP13.59□□□□□ -0.23
NDUFS3-213ENST00000534716 PPP1R1AQ13522 171 aa13.59□□□□□ -0.23
NDUFS3-213ENST00000534716 CLUHP3Q96NS8 147 aa13.59□□□□□ -0.23
NDUFS3-213ENST00000534716 RBM38Q9H0Z9 239 aaKnown RBP13.59□□□□□ -0.23
NDUFS3-213ENST00000534716 ZNF701M0R085 212 aaPredicted RBP13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 SOCS3O14543 225 aa13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 SYNGR2O43760 224 aa13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 CFDP00746 253 aaPredicted RBP13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 IAPPP10997 89 aa13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 PSMB3P49720 205 aa13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 NEU1Q99519 415 aa13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 WDR12Q9GZL7 423 aaKnown RBP13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 SAV1Q9H4B6 383 aaPredicted RBP13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 AGRNO00468 2067 aa13.58□□□□□ -0.24
NDUFS3-213ENST00000534716 TRAV10A0A0B4J240 114 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 IGLL5B9A064 214 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 ID1P41134 155 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 LYZP61626 148 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 SAMD13Q5VXD3 122 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 SPATA31B1PQ5VZV4 182 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 GGNBP1Q5YKI7 109 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 ZNF705AQ6ZN79 300 aaPredicted RBP13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 FOXI2Q6ZQN5 318 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 Q6ZTC4 211 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 CENPSQ8N2Z9 138 aa13.57□□□□□ -0.24
NDUFS3-213ENST00000534716 XCL2Q9UBD3 114 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms