RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 LYZL2Q7Z4W2 148 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 NPIPB3Q92617 1050 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 SRRQ9GZT4 340 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 A0A0J9YWU9 116 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 TMEM189A5PLL7 270 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 NDUFB6O95139 128 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 IFNA21P01568 189 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 IFNA4P05014 189 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 INPP1P49441 399 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 DHRS2Q13268 280 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 ZNF79Q15937 498 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 DEFB135Q30KP9 77 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 TMEM170AQ8WVE7 144 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 RNF125Q96EQ8 232 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 SYNGR2O43760 224 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 RPL35AP18077 110 aaKnown RBP7.62□□□□□ -1.19
CSDE1-217ENST00000534699 SIGLEC15Q6ZMC9 328 aa7.62□□□□□ -1.19
CSDE1-217ENST00000534699 MRPL36Q9P0J6 103 aaKnown RBP7.62□□□□□ -1.19
CSDE1-217ENST00000534699 IL4P05112 153 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 SELENOTP62341 195 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 TRIQKQ629K1 86 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 LGALS9CQ6DKI2 356 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 GGACTQ9BVM4 153 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 SNRPGP15A8MWD9 76 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 K7EPK0 472 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 APOHP02749 345 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-217ENST00000534699 RPL11P62913 178 aaKnown RBP7.61□□□□□ -1.19
CSDE1-217ENST00000534699 ID3Q02535 119 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 STXBP6Q8NFX7 210 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 OR1B1Q8NGR6 318 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 OR11H2Q8NH07 326 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 LINC00476Q8WZB0 136 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 SMIM8Q96KF7 97 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 FAM210BQ96KR6 192 aa7.61□□□□□ -1.19
CSDE1-217ENST00000534699 DYNC2H1Q8NCM8 4307 aaKnown RBP7.6□□□□□ -1.19
CSDE1-217ENST00000534699 CXorf65A6NEN9 183 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 CCDC160A6NGH7 325 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 CA1P00915 261 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-217ENST00000534699 PSG1P11464 419 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 PLP1P60201 277 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 GAMTQ14353 236 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 APRG1Q8IVJ8 170 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 STRAPQ9Y3F4 350 aaKnown RBP7.6□□□□□ -1.19
CSDE1-217ENST00000534699 A8MTW9 85 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 ISLRO14498 428 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 B2MP61769 119 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 DLK1P80370 383 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 FOXI2Q6ZQN5 318 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 BPIFCQ8NFQ6 507 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 RAB40CQ96S21 281 aa7.6□□□□□ -1.19
CSDE1-217ENST00000534699 C9orf170A2RU37 121 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 ZFP92A6NM28 416 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 IGHV3-48P01763 117 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 HLA-DRB4P13762 266 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 TFPI2P48307 235 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 PAX9P55771 341 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 USF2Q15853 346 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-217ENST00000534699 MLANAQ16655 118 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 TMEM144Q7Z5S9 345 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 C11orf45Q8TAV5 145 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 ACY3Q96HD9 319 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 CLEC5AQ9NY25 188 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 HLA-DRB4X5D2U9 266 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 PRSS46E5RG02 174 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 TSC22D2O75157 780 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 NXPH3O95157 252 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 VAMP1P23763 118 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 GALR1P47211 349 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 PPP1R1AQ13522 171 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 TMED4Q7Z7H5 227 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 LILRB2Q8N423 598 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 GBGT1Q8N5D6 347 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 TENM3Q9P273 2699 aa7.59□□□□□ -1.19
CSDE1-217ENST00000534699 IGKV1D-37A0A075B6S9 117 aa7.58□□□□□ -1.2
CSDE1-217ENST00000534699 IGHV3OR16-8A0A075B7F1 116 aa7.58□□□□□ -1.2
CSDE1-217ENST00000534699 IGHV3-49A0A0A0MS15 119 aa7.58□□□□□ -1.2
CSDE1-217ENST00000534699 POLR2GP62487 172 aaKnown RBP eCLIP7.58□□□□□ -1.2
CSDE1-217ENST00000534699 OXA1LQ15070 435 aa7.58□□□□□ -1.2
CSDE1-217ENST00000534699 PHLDA1Q8WV24 401 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-217ENST00000534699 DNAH7Q8WXX0 4024 aa7.58□□□□□ -1.2
CSDE1-217ENST00000534699 CXCL2P19875 107 aa7.58□□□□□ -1.2
CSDE1-217ENST00000534699 Q8NAQ8 132 aa7.58□□□□□ -1.2
CSDE1-217ENST00000534699 CCDC32Q9BV29 185 aa7.58□□□□□ -1.2
CSDE1-217ENST00000534699 SAV1Q9H4B6 383 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-217ENST00000534699 H3BMM0 161 aa7.57□□□□□ -1.2
CSDE1-217ENST00000534699 DUSP14O95147 198 aaKnown RBP7.57□□□□□ -1.2
CSDE1-217ENST00000534699 CSNK1G2-AS1Q8NCQ2 148 aa7.57□□□□□ -1.2
CSDE1-217ENST00000534699 C2CD4CQ8TF44 421 aa7.57□□□□□ -1.2
CSDE1-217ENST00000534699 TBC1D24Q9ULP9 559 aa7.57□□□□□ -1.2
CSDE1-217ENST00000534699 STAB2Q8WWQ8 2551 aa7.57□□□□□ -1.2
CSDE1-217ENST00000534699 TRAV10A0A0B4J240 114 aa7.57□□□□□ -1.2
CSDE1-217ENST00000534699 WRBO00258 174 aa7.57□□□□□ -1.2
CSDE1-217ENST00000534699 RNF126Q9BV68 326 aa7.57□□□□□ -1.2
CSDE1-217ENST00000534699 SOCS3O14543 225 aa7.56□□□□□ -1.2
CSDE1-217ENST00000534699 OR4E1P0C645 316 aa7.56□□□□□ -1.2
CSDE1-217ENST00000534699 MITD1Q8WV92 249 aa7.56□□□□□ -1.2
CSDE1-217ENST00000534699 TMEM147Q9BVK8 224 aa7.56□□□□□ -1.2
CSDE1-217ENST00000534699 A0A087X0K7 114 aa7.56□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF688P0C7X2 276 aa7.56□□□□□ -1.2
CSDE1-217ENST00000534699 RPRMQ9NS64 109 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms