RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 TMEM116Q8NCL8 245 aa9.27□□□□□ -0.93
USF1-211ENST00000534633 CIB3Q96Q77 187 aaPredicted RBP9.27□□□□□ -0.93
USF1-211ENST00000534633 K7EPK0 472 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 GNG7O60262 68 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 CCNKO75909 580 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 SCGB1D2O95969 90 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 IFNA4P05014 189 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 IGLC1P0CG04 106 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 SLC25A4P12235 298 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 GPX4P36969 197 aaPredicted RBP9.26□□□□□ -0.93
USF1-211ENST00000534633 RND2P52198 227 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 H2BFSP57053 126 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 GAMTQ14353 236 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 OXA1LQ15070 435 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 SPANXN5Q5MJ07 72 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 TOMM20LQ6UXN7 152 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 GSG1LQ6UXU4 331 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 NOXA1Q86UR1 476 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 NPIPB3Q92617 1050 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 C20orf24Q9BUV8 137 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 MAP6D1Q9H9H5 199 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 PSENENQ9NZ42 101 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 ALG5Q9Y673 324 aa9.26□□□□□ -0.93
USF1-211ENST00000534633 IGKV1D-37A0A075B6S9 117 aa9.25□□□□□ -0.93
USF1-211ENST00000534633 GOSR2O14653 212 aa9.25□□□□□ -0.93
USF1-211ENST00000534633 NUPL2O15504 423 aaKnown RBP9.25□□□□□ -0.93
USF1-211ENST00000534633 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
USF1-211ENST00000534633 TAS2R30P59541 319 aa9.25□□□□□ -0.93
USF1-211ENST00000534633 ARL16Q0P5N6 197 aa9.25□□□□□ -0.93
USF1-211ENST00000534633 RAB32Q13637 225 aa9.25□□□□□ -0.93
USF1-211ENST00000534633 TIGITQ495A1 244 aa9.25□□□□□ -0.93
USF1-211ENST00000534633 TMEM14EPQ6UXP3 125 aa9.25□□□□□ -0.93
USF1-211ENST00000534633 RAB40CQ96S21 281 aa9.25□□□□□ -0.93
USF1-211ENST00000534633 ZFAND3Q9H8U3 227 aa9.25□□□□□ -0.93
USF1-211ENST00000534633 IGKV1OR2-108A0A075B7D4 117 aa9.24□□□□□ -0.93
USF1-211ENST00000534633 RPS10-NUDT3A0A1W2PQS6 291 aa9.24□□□□□ -0.93
USF1-211ENST00000534633 H0YIZ8 118 aa9.24□□□□□ -0.93
USF1-211ENST00000534633 ZNF207O43670 478 aaKnown RBP9.24□□□□□ -0.93
USF1-211ENST00000534633 CMC4P56277 68 aaPredicted RBP9.24□□□□□ -0.93
USF1-211ENST00000534633 RAB11AP62491 216 aa9.24□□□□□ -0.93
USF1-211ENST00000534633 ETFRF1Q6IPR1 90 aa9.24□□□□□ -0.93
USF1-211ENST00000534633 ACY3Q96HD9 319 aa9.24□□□□□ -0.93
USF1-211ENST00000534633 SMPXQ9UHP9 88 aa9.24□□□□□ -0.93
USF1-211ENST00000534633 PAIP2BQ9ULR5 123 aaKnown RBP9.24□□□□□ -0.93
USF1-211ENST00000534633 STRAPQ9Y3F4 350 aaKnown RBP9.24□□□□□ -0.93
USF1-211ENST00000534633 LSM5Q9Y4Y9 91 aaKnown RBP9.24□□□□□ -0.93
USF1-211ENST00000534633 SSNA1O43805 119 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 TSC22D2O75157 780 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 APOHP02749 345 aaPredicted RBP9.23□□□□□ -0.93
USF1-211ENST00000534633 CXCL3P19876 107 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 OR10J1P30954 320 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 RPP30P78346 268 aaKnown RBP9.23□□□□□ -0.93
USF1-211ENST00000534633 RELQ04864 619 aaPredicted RBP9.23□□□□□ -0.93
USF1-211ENST00000534633 RGS21Q2M5E4 152 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 LGALS9CQ6DKI2 356 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 ZNF600Q6ZNG1 722 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 LILRB2Q8N423 598 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 PHLDA1Q8WV24 401 aaPredicted RBP9.23□□□□□ -0.93
USF1-211ENST00000534633 RNF2Q99496 336 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 NMES1Q9C002 83 aa9.23□□□□□ -0.93
USF1-211ENST00000534633 PUS1Q9Y606 427 aaKnown RBP eCLIP9.23□□□□□ -0.93
USF1-211ENST00000534633 TRAV30A0A087WSZ9 112 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 IGHV7-4-1A0A0J9YVY3 117 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 FAM24AA6NFZ4 105 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 CHEK1O14757 476 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 YIF1AO95070 293 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 METTL15P1P0C7V9 234 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 YPEL3P61236 119 aaPredicted RBP9.22□□□□□ -0.93
USF1-211ENST00000534633 ZNF90Q03938 601 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 TMEM182Q6ZP80 229 aaPredicted RBP9.22□□□□□ -0.93
USF1-211ENST00000534633 APRG1Q8IVJ8 170 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 RPP25LQ8N5L8 163 aaKnown RBP9.22□□□□□ -0.93
USF1-211ENST00000534633 OR1S2Q8NGQ3 325 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 RNF126Q9BV68 326 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 RHPN1-AS1Q9BWJ2 59 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 CSTL1Q9H114 145 aa9.22□□□□□ -0.93
USF1-211ENST00000534633 TRAV14DV4A0A0A6YYC5 116 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 FCN2Q15485 313 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 OR8G2PQ6IF36 304 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 ACOT7LQ6ZUV0 252 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 THAP8Q8NA92 274 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 OR11H7Q8NGC8 314 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 RARRES2Q99969 163 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 MFFQ9GZY8 342 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 C11orf68Q9H3H3 251 aaKnown RBP9.21□□□□□ -0.94
USF1-211ENST00000534633 OR5AC2Q9NZP5 309 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 MGAT4CQ9UBM8 478 aa9.21□□□□□ -0.94
USF1-211ENST00000534633 IGHV3OR16-13A0A075B7E8 117 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 IGHV3-49A0A0A0MS15 119 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 IGHV3-74A0A0B4J1X5 117 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 IGSF23A1L1A6 192 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 DEDDO75618 318 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 CD5P06127 495 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 PSG1P11464 419 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 S100A10P60903 97 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 ZNF124Q15973 351 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 FAM90A2PQ658T7 463 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 PPP1R1CQ8WVI7 109 aa9.2□□□□□ -0.94
USF1-211ENST00000534633 SLC35E1Q96K37 410 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms