RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 S100A5P33763 92 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 APOC4P55056 127 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 FXYD7P58549 80 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 YPEL3P61236 119 aaPredicted RBP7□□□□□ -1.29
SSBP3-215ENST00000533946 POLR2GP62487 172 aaKnown RBP eCLIP7□□□□□ -1.29
SSBP3-215ENST00000533946 ARL16Q0P5N6 197 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 ACTL10Q5JWF8 245 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 IGFL4Q6B9Z1 124 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 ZNF767PQ75MW2 155 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 KIR2DL5AQ8N109 375 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 LRTM2Q8N967 370 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 KIR2DL5BQ8NHK3 375 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 C20orf173Q96LM9 149 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 PBDC1Q9BVG4 233 aa7□□□□□ -1.29
SSBP3-215ENST00000533946 ELOA3CA0A087WX78 387 aaPredicted RBP6.99□□□□□ -1.29
SSBP3-215ENST00000533946 PMS2P5A8MQ11 134 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 FAM90A26D6RGX4 464 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 F6UB75 175 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 CCSO14618 274 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 NDUFB6O95139 128 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 IGKV3-20P01619 116 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 PRM2P04554 102 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 HNRNPCP07910 306 aaKnown RBP eCLIP6.99□□□□□ -1.292e-6■■■□□ 18.7
SSBP3-215ENST00000533946 SLC25A4P12235 298 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 IL7P13232 177 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 BMI1P35226 326 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 DHRS2Q13268 280 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 PSMG4Q5JS54 123 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 CENPSQ8N2Z9 138 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 CSNK1G2-AS1Q8NCQ2 148 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 Q8WTZ3 238 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 SCGB3A2Q96PL1 93 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 RAB40CQ96S21 281 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 TP53TG1Q9Y2A0 90 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 X6R8D5 127 aa6.99□□□□□ -1.29
SSBP3-215ENST00000533946 RPS10-NUDT3A0A1W2PQS6 291 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 ZNF701M0R085 212 aaPredicted RBP6.98□□□□□ -1.29
SSBP3-215ENST00000533946 UBE2CO00762 179 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 SYNGR2O43760 224 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 OR4E1P0C645 316 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 LYZP61626 148 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 SPANXN5Q5MJ07 72 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 SPANXN2Q5MJ10 180 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 RPP25LQ8N5L8 163 aaKnown RBP6.98□□□□□ -1.29
SSBP3-215ENST00000533946 Q8NAQ8 132 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 OR4D5Q8NGN0 318 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 RNF125Q96EQ8 232 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 RARRES2Q99969 163 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 SLC25A21Q9BQT8 299 aaPredicted RBP6.98□□□□□ -1.29
SSBP3-215ENST00000533946 SEC22CQ9BRL7 303 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 PLA2G2EQ9NZK7 142 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 CELA1Q9UNI1 258 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 U3KQ87 197 aa6.98□□□□□ -1.29
SSBP3-215ENST00000533946 TRAV6A0A075B6T7 132 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 TRAV30A0A087WSZ9 112 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 IGHV4-28A0A0C4DH34 117 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 ZFP92A6NM28 416 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 SOCS3O14543 225 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 DEDDO75618 318 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 SNRPCP09234 159 aaKnown RBP6.97□□□□□ -1.29
SSBP3-215ENST00000533946 ANXA3P12429 323 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 HLA-DMBP28068 263 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 FAUP35544 74 aaKnown RBP6.97□□□□□ -1.29
SSBP3-215ENST00000533946 AP3S2P59780 193 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 PAFAH1B2P68402 229 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 PRR20EP86478 221 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 PRR20CP86479 221 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 PRR20DP86480 221 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 PRR20BP86481 221 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 PRR20AP86496 221 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 ID3Q02535 119 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 CEMP1Q6PRD7 247 aaPredicted RBP6.97□□□□□ -1.29
SSBP3-215ENST00000533946 SIGLEC15Q6ZMC9 328 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 THAP8Q8NA92 274 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 DOK5Q9P104 306 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 FBXL17Q9UF56 701 aa6.97□□□□□ -1.29
SSBP3-215ENST00000533946 TRAV2A0A0B4J234 112 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 A0A1W2PS18 150 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 HELTA6NFD8 242 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 H3BMM0 161 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 SSSCA1O60232 199 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 ZNF705DP0CH99 300 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-215ENST00000533946 ZNF705BP0CI00 300 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-215ENST00000533946 GPX4P36969 197 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-215ENST00000533946 RRAS2P62070 204 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-215ENST00000533946 SRPXP78539 464 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 IFITM3Q01628 133 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 TRIQKQ629K1 86 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 ACOT7LQ6ZUV0 252 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 STHQ8IWL8 128 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 PHLDA1Q8WV24 401 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-215ENST00000533946 GRAMD2BQ96HH9 432 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 SLC25A32Q9H2D1 315 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 XCL2Q9UBD3 114 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 RCL1Q9Y2P8 373 aaKnown RBP6.96□□□□□ -1.3
SSBP3-215ENST00000533946 TMED3Q9Y3Q3 217 aa6.96□□□□□ -1.3
SSBP3-215ENST00000533946 TRAV8-2A0A0B4J237 113 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 DUXBA0A1W2PPF3 345 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 LY6G6CO95867 125 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms