RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 IGKV3-20P01619 116 aa12.87□□□□□ -0.35
UBXN1-216ENST00000533908 MED14OSP0DP75 135 aa12.87□□□□□ -0.35
UBXN1-216ENST00000533908 ZNF182P17025 639 aaPredicted RBP12.87□□□□□ -0.35
UBXN1-216ENST00000533908 NPY1RP25929 384 aa12.87□□□□□ -0.35
UBXN1-216ENST00000533908 EMP1P54849 157 aa12.87□□□□□ -0.35
UBXN1-216ENST00000533908 NUTF2P61970 127 aaKnown RBP12.87□□□□□ -0.35
UBXN1-216ENST00000533908 TMEM268Q5VZI3 342 aa12.87□□□□□ -0.35
UBXN1-216ENST00000533908 NEU1Q99519 415 aa12.87□□□□□ -0.35
UBXN1-216ENST00000533908 WDR12Q9GZL7 423 aaKnown RBP12.87□□□□□ -0.35
UBXN1-216ENST00000533908 PRR13Q9NZ81 148 aa12.87□□□□□ -0.35
UBXN1-216ENST00000533908 GPR132Q9UNW8 380 aa12.87□□□□□ -0.35
UBXN1-216ENST00000533908 NKX2-1P43699 371 aaPredicted RBP12.86□□□□□ -0.35
UBXN1-216ENST00000533908 NMSQ5H8A3 153 aa12.86□□□□□ -0.35
UBXN1-216ENST00000533908 TMEM56-RWDD3S4R434 201 aa12.86□□□□□ -0.35
UBXN1-216ENST00000533908 CRYM-AS1A6NIL9 109 aa12.85□□□□□ -0.35
UBXN1-216ENST00000533908 SPART-AS1P0CW21 52 aa12.85□□□□□ -0.35
UBXN1-216ENST00000533908 LGALS9BQ3B8N2 356 aa12.85□□□□□ -0.35
UBXN1-216ENST00000533908 GPR107Q5VW38 600 aa12.85□□□□□ -0.35
UBXN1-216ENST00000533908 Q6ZR54 194 aa12.85□□□□□ -0.35
UBXN1-216ENST00000533908 C14orf166Q9Y224 244 aaKnown RBP12.85□□□□□ -0.35
UBXN1-216ENST00000533908 MUC4Q99102 2169 aa12.84□□□□□ -0.35
UBXN1-216ENST00000533908 IGLV2-18A0A075B6J9 118 aa12.84□□□□□ -0.35
UBXN1-216ENST00000533908 IGKV1D-37A0A075B6S9 117 aa12.84□□□□□ -0.35
UBXN1-216ENST00000533908 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
UBXN1-216ENST00000533908 GABARAPH6UMI1 98 aa12.84□□□□□ -0.35
UBXN1-216ENST00000533908 GABARAPO95166 117 aa12.84□□□□□ -0.35
UBXN1-216ENST00000533908 ETFRF1Q6IPR1 90 aa12.84□□□□□ -0.35
UBXN1-216ENST00000533908 ZNF709Q8N972 641 aa12.84□□□□□ -0.35
UBXN1-216ENST00000533908 RNF125Q96EQ8 232 aa12.84□□□□□ -0.35
UBXN1-216ENST00000533908 SAV1Q9H4B6 383 aaPredicted RBP12.84□□□□□ -0.35
UBXN1-216ENST00000533908 SOCS3O14543 225 aa12.83□□□□□ -0.36
UBXN1-216ENST00000533908 CTDSP2O14595 271 aa12.83□□□□□ -0.36
UBXN1-216ENST00000533908 ZNF90Q03938 601 aa12.83□□□□□ -0.36
UBXN1-216ENST00000533908 OR4C16Q8NGL9 310 aa12.83□□□□□ -0.36
UBXN1-216ENST00000533908 AP3S1Q92572 193 aa12.83□□□□□ -0.36
UBXN1-216ENST00000533908 LINC00052Q96N35 136 aa12.83□□□□□ -0.36
UBXN1-216ENST00000533908 KRTAP4-5Q9BYR2 181 aa12.83□□□□□ -0.36
UBXN1-216ENST00000533908 SLC35B3Q9H1N7 401 aa12.83□□□□□ -0.36
UBXN1-216ENST00000533908 DKK2Q9UBU2 259 aa12.83□□□□□ -0.36
UBXN1-216ENST00000533908 SMIM9A6NGZ8 99 aa12.82□□□□□ -0.36
UBXN1-216ENST00000533908 F6UB75 175 aa12.82□□□□□ -0.36
UBXN1-216ENST00000533908 GSTZ1O43708 216 aaPredicted RBP12.82□□□□□ -0.36
UBXN1-216ENST00000533908 IFNA10P01566 189 aa12.82□□□□□ -0.36
UBXN1-216ENST00000533908 SULT1A3P0DMM9 295 aa12.82□□□□□ -0.36
UBXN1-216ENST00000533908 SULT1A4P0DMN0 295 aa12.82□□□□□ -0.36
UBXN1-216ENST00000533908 KLF9Q13886 244 aaPredicted RBP12.82□□□□□ -0.36
UBXN1-216ENST00000533908 SURF2Q15527 256 aaPredicted RBP12.82□□□□□ -0.36
UBXN1-216ENST00000533908 FAM222AQ5U5X8 452 aa12.82□□□□□ -0.36
UBXN1-216ENST00000533908 C1orf158Q8N1D5 194 aa12.82□□□□□ -0.36
UBXN1-216ENST00000533908 PBDC1Q9BVG4 233 aa12.82□□□□□ -0.36
UBXN1-216ENST00000533908 TMEM189A5PLL7 270 aa12.81□□□□□ -0.36
UBXN1-216ENST00000533908 SSBP1Q04837 148 aaKnown RBP12.81□□□□□ -0.36
UBXN1-216ENST00000533908 GAMTQ14353 236 aa12.81□□□□□ -0.36
UBXN1-216ENST00000533908 NOXA1Q86UR1 476 aa12.81□□□□□ -0.36
UBXN1-216ENST00000533908 OR51S1Q8NGJ8 323 aa12.81□□□□□ -0.36
UBXN1-216ENST00000533908 C15orf40Q8WUR7 153 aa12.81□□□□□ -0.36
UBXN1-216ENST00000533908 CLUHP3Q96NS8 147 aa12.81□□□□□ -0.36
UBXN1-216ENST00000533908 RBKSQ9H477 322 aa12.81□□□□□ -0.36
UBXN1-216ENST00000533908 HSPB7Q9UBY9 170 aa12.81□□□□□ -0.36
UBXN1-216ENST00000533908 RFNGQ9Y644 331 aa12.81□□□□□ -0.36
UBXN1-216ENST00000533908 DISC1C4P0D8 188 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 IFNA21P01568 189 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 SMIM18P0DKX4 95 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 ZNF79Q15937 498 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 FOXI2Q6ZQN5 318 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 LYZL2Q7Z4W2 148 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 LGI3Q8N145 548 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 OR4B1Q8NGF8 309 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 NIPSNAP3BQ9BS92 247 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 U3KQ87 197 aa12.8□□□□□ -0.36
UBXN1-216ENST00000533908 AKAIN1P0CW23 69 aa12.79□□□□□ -0.36
UBXN1-216ENST00000533908 PSMB3P49720 205 aa12.79□□□□□ -0.36
UBXN1-216ENST00000533908 SUPT4H1P63272 117 aaKnown RBP12.79□□□□□ -0.36
UBXN1-216ENST00000533908 OR8G2PQ6IF36 304 aa12.79□□□□□ -0.36
UBXN1-216ENST00000533908 ZNF575Q86XF7 245 aa12.79□□□□□ -0.36
UBXN1-216ENST00000533908 DTD1Q8TEA8 209 aa12.79□□□□□ -0.36
UBXN1-216ENST00000533908 SMIM4Q8WVI0 70 aa12.79□□□□□ -0.36
UBXN1-216ENST00000533908 IL22RA2Q969J5 263 aa12.79□□□□□ -0.36
UBXN1-216ENST00000533908 FAM210BQ96KR6 192 aa12.79□□□□□ -0.36
UBXN1-216ENST00000533908 C17orf77Q96MU5 243 aa12.79□□□□□ -0.36
UBXN1-216ENST00000533908 ABCA13Q86UQ4 5058 aa12.78□□□□□ -0.36
UBXN1-216ENST00000533908 ZFP92A6NM28 416 aa12.78□□□□□ -0.36
UBXN1-216ENST00000533908 HTN3P15516 51 aa12.78□□□□□ -0.36
UBXN1-216ENST00000533908 GPX4P36969 197 aaPredicted RBP12.78□□□□□ -0.36
UBXN1-216ENST00000533908 OR2F1Q13607 317 aa12.78□□□□□ -0.36
UBXN1-216ENST00000533908 FAM78BQ5VT40 261 aa12.78□□□□□ -0.36
UBXN1-216ENST00000533908 UBE2DNLQ8IWF7 75 aa12.78□□□□□ -0.36
UBXN1-216ENST00000533908 C20orf173Q96LM9 149 aa12.78□□□□□ -0.36
UBXN1-216ENST00000533908 YTHDF2Q9Y5A9 579 aaKnown RBP12.78□□□□□ -0.36
UBXN1-216ENST00000533908 NACAE9PAV3 2078 aa12.77□□□□□ -0.36
UBXN1-216ENST00000533908 IGKV1OR2-108A0A075B7D4 117 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 RGS5O15539 181 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 PRM2P04554 102 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 ID1P41134 155 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 CCR6P51684 374 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 PAX9P55771 341 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 LYZP61626 148 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 MRPS10P82664 201 aaKnown RBP12.77□□□□□ -0.37
UBXN1-216ENST00000533908 PSG9Q00887 426 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 SMCO1Q147U7 214 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms