RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TSPAN14Q8NG11 270 aa6.9□□□□□ -1.3
CSDE1-215ENST00000533818 TMEM37Q8WXS4 190 aa6.9□□□□□ -1.3
CSDE1-215ENST00000533818 SLC7A6OSQ96CW6 309 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-215ENST00000533818 C20orf173Q96LM9 149 aa6.9□□□□□ -1.3
CSDE1-215ENST00000533818 SLC25A39Q9BZJ4 359 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-215ENST00000533818 DIMT1Q9UNQ2 313 aaKnown RBP6.9□□□□□ -1.3
CSDE1-215ENST00000533818 TMEM272A0A1B0GTI8 110 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 CORTO00230 105 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 LECT2O14960 151 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 F2RP25116 425 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 FCGR2CP31995 323 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 CDKN1BP46527 198 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 YPEL3P61236 119 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-215ENST00000533818 MRPL23Q16540 153 aaKnown RBP6.89□□□□□ -1.31
CSDE1-215ENST00000533818 SMN1Q16637 294 aaKnown RBP6.89□□□□□ -1.31
CSDE1-215ENST00000533818 NEGR1Q7Z3B1 354 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 OR6F1Q8NGZ6 308 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 OR4A16Q8NH70 328 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 FCAMRQ8WWV6 532 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 LINC01600Q96MT4 127 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 GFI1Q99684 422 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 DAPK2Q9UIK4 370 aa6.89□□□□□ -1.31
CSDE1-215ENST00000533818 TRGV2A0A075B6R0 118 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 SNURFLB1AK76 121 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 IBA57-AS1B1ANH7 110 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 BOLA2-SMG1P6H3BVE0 249 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 ZNF324O75467 553 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-215ENST00000533818 ALPLP05186 524 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 IGLC1P0CG04 106 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 SUB1P53999 127 aaKnown RBP eCLIP6.88□□□□□ -1.314e-8■■■□□ 15.4
CSDE1-215ENST00000533818 HSPE1P61604 102 aaKnown RBP6.88□□□□□ -1.31
CSDE1-215ENST00000533818 GAMTQ14353 236 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 SPINK9Q5DT21 86 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 HES5Q5TA89 166 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 HACD4Q5VWC8 232 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 ZNF818PQ6ZRF7 136 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 CCDC28AQ8IWP9 274 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 HSD17B11Q8NBQ5 300 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 OR1S2Q8NGQ3 325 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 OR52E5Q8NH55 327 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 APH1BQ8WW43 257 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 C16orf92Q96LL3 132 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 ANXA10Q9UJ72 324 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 POMPQ9Y244 141 aa6.88□□□□□ -1.31
CSDE1-215ENST00000533818 AK6Q9Y3D8 172 aaKnown RBP6.88□□□□□ -1.31
CSDE1-215ENST00000533818 IRGMA1A4Y4 181 aa6.87□□□□□ -1.31
CSDE1-215ENST00000533818 PPYP01298 95 aa6.87□□□□□ -1.31
CSDE1-215ENST00000533818 ZNF182P17025 639 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-215ENST00000533818 OR10J1P30954 320 aa6.87□□□□□ -1.31
CSDE1-215ENST00000533818 NUP62P37198 522 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-215ENST00000533818 FXYD4P59646 89 aa6.87□□□□□ -1.31
CSDE1-215ENST00000533818 Q6ZTI0 123 aa6.87□□□□□ -1.31
CSDE1-215ENST00000533818 PFDN2Q9UHV9 154 aa6.87□□□□□ -1.31
CSDE1-215ENST00000533818 AP4S1Q9Y587 144 aa6.87□□□□□ -1.31
CSDE1-215ENST00000533818 H7BYZ3 331 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 CCNKO75909 580 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 RD3LP0DJH9 198 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 RNASE2P10153 161 aaKnown RBP6.86□□□□□ -1.31
CSDE1-215ENST00000533818 CALB2P22676 271 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 RPL5P46777 297 aaKnown RBP6.86□□□□□ -1.31
CSDE1-215ENST00000533818 WNT4P56705 351 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 CDNFQ49AH0 187 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 SAMD13Q5VXD3 122 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 MS4A15Q8N5U1 240 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 OR51G1Q8NGK1 321 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 CENPNQ96H22 339 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-215ENST00000533818 TMEM80Q96HE8 168 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 TM2D2Q9BX73 214 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 PPP1R14DQ9NXH3 145 aa6.86□□□□□ -1.31
CSDE1-215ENST00000533818 PRAF2O60831 178 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 RLN1P04808 185 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 UCHL1P09936 223 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 PTHLHP12272 177 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 FCGR1AP12314 374 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 GYPEP15421 78 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 TNFSF8P32971 234 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 RANBP1P43487 201 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 HSPA13P48723 471 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 RND2P52198 227 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 RHOBP62745 196 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 ARL6IP1Q15041 203 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 MORN5Q5VZ52 161 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 PBDC1Q9BVG4 233 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 PRO0255Q9UI72 69 aa6.85□□□□□ -1.31
CSDE1-215ENST00000533818 METTL21EPA6NDL7 271 aa6.84□□□□□ -1.31
CSDE1-215ENST00000533818 TMEM235A6NFC5 223 aa6.84□□□□□ -1.31
CSDE1-215ENST00000533818 EI24O14681 340 aa6.84□□□□□ -1.31
CSDE1-215ENST00000533818 WBP4O75554 376 aaKnown RBP6.84□□□□□ -1.31
CSDE1-215ENST00000533818 PGLYRP1O75594 196 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-215ENST00000533818 MEOX2P50222 304 aa6.84□□□□□ -1.31
CSDE1-215ENST00000533818 GYS2P54840 703 aa6.84□□□□□ -1.31
CSDE1-215ENST00000533818 ZNF415Q09FC8 603 aa6.84□□□□□ -1.31
CSDE1-215ENST00000533818 DAZ2Q13117 558 aaKnown RBP6.84□□□□□ -1.31
CSDE1-215ENST00000533818 C1orf194Q5T5A4 169 aa6.84□□□□□ -1.31
CSDE1-215ENST00000533818 H2BFWTQ7Z2G1 175 aa6.84□□□□□ -1.31
CSDE1-215ENST00000533818 TMEM17Q86X19 198 aa6.84□□□□□ -1.31
CSDE1-215ENST00000533818 ARGLU1Q9NWB6 273 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-215ENST00000533818 IGHV3-38A0A0C4DH36 116 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 EFCAB10A6NFE3 127 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 C9JCJ5 164 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms