RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PVRIGQ6DKI7 326 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 TMEM14EPQ6UXP3 125 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 ZNF546Q86UE3 836 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 NOXA1Q86UR1 476 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 SLC24A4Q8NFF2 622 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 OR1P1Q8NH06 330 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 IL17DQ8TAD2 202 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 HYLS1Q96M11 299 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 GGTLC1Q9BX51 225 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 TNFSF18Q9UNG2 199 aa8.42□□□□□ -1.06
CLCF1-202ENST00000533438 STRAPQ9Y3F4 350 aaKnown RBP8.42□□□□□ -1.06
CLCF1-202ENST00000533438 FAM24AA6NFZ4 105 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 H3BP45 60 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 K7EMT4 169 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 IFNA10P01566 189 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 CTSGP08311 255 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 NPY1RP25929 384 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 FCGR2BP31994 310 aaPredicted RBP8.41□□□□□ -1.06
CLCF1-202ENST00000533438 CAV2P51636 162 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 SUB1P53999 127 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLCF1-202ENST00000533438 SPANXN5Q5MJ07 72 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 TMEM252Q8N6L7 170 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 TMEM170AQ8WVE7 144 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 AQP10Q96PS8 301 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 OVOL2Q9BRP0 275 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 SLC25A31Q9H0C2 315 aa8.41□□□□□ -1.06
CLCF1-202ENST00000533438 IGHV3OR16-8A0A075B7F1 116 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 IGSF23A1L1A6 192 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 RNF222A6NCQ9 220 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 PMS2P5A8MQ11 134 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 I3L2K1 104 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 RPL12P30050 165 aaKnown RBP8.4□□□□□ -1.06
CLCF1-202ENST00000533438 RAB11AP62491 216 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 BAXQ07812 192 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 ZNF345Q14585 488 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 PLECQ15149 4684 aaKnown RBP8.4□□□□□ -1.06
CLCF1-202ENST00000533438 ODF3L2Q3SX64 289 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 Q56UQ5 140 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 UBAC2Q8NBM4 344 aa8.4□□□□□ -1.06
CLCF1-202ENST00000533438 INO80EQ8NBZ0 244 aaPredicted RBP8.4□□□□□ -1.06
CLCF1-202ENST00000533438 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 CORTO00230 105 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 ARPC5O15511 151 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 ZNF207O43670 478 aaKnown RBP8.39□□□□□ -1.07
CLCF1-202ENST00000533438 METTL15P1P0C7V9 234 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 NUP62P37198 522 aaPredicted RBP8.39□□□□□ -1.07
CLCF1-202ENST00000533438 SULT1A1P50225 295 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 EWSR1Q01844 656 aaKnown RBP eCLIP8.39□□□□□ -1.07
CLCF1-202ENST00000533438 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
CLCF1-202ENST00000533438 OR2F1Q13607 317 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 LAMTOR1Q6IAA8 161 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 ACOT7LQ6ZUV0 252 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 STX12Q86Y82 276 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 WFDC3Q8IUB2 231 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 RNASEH2CQ8TDP1 164 aaKnown RBP8.39□□□□□ -1.07
CLCF1-202ENST00000533438 MISP3Q96FF7 219 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 TXN2Q99757 166 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 C20orf24Q9BUV8 137 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 MFFQ9GZY8 342 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 UBQLN2Q9UHD9 624 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 SMPXQ9UHP9 88 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 HSPB11Q9Y547 144 aa8.39□□□□□ -1.07
CLCF1-202ENST00000533438 BOLA2-SMG1P6H3BVE0 249 aa8.38□□□□□ -1.07
CLCF1-202ENST00000533438 NUPL2O15504 423 aaKnown RBP8.38□□□□□ -1.07
CLCF1-202ENST00000533438 MT-CO2P00403 227 aa8.38□□□□□ -1.07
CLCF1-202ENST00000533438 IFNA4P05014 189 aa8.38□□□□□ -1.07
CLCF1-202ENST00000533438 HNRNPCP07910 306 aaKnown RBP eCLIP8.38□□□□□ -1.07
CLCF1-202ENST00000533438 MFAP4P55083 255 aa8.38□□□□□ -1.07
CLCF1-202ENST00000533438 ARL16Q0P5N6 197 aa8.38□□□□□ -1.07
CLCF1-202ENST00000533438 OR10P1Q8NGE3 313 aa8.38□□□□□ -1.07
CLCF1-202ENST00000533438 PAIP2BQ9ULR5 123 aaKnown RBP8.38□□□□□ -1.07
CLCF1-202ENST00000533438 TP53TG1Q9Y2A0 90 aa8.38□□□□□ -1.07
CLCF1-202ENST00000533438 A0A0D9SG52 128 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 IGHV7-4-1A0A0J9YVY3 117 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 OR4C46A6NHA9 309 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 CHEK1O14757 476 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 CST7O76096 145 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 CXCL2P19875 107 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 S100A11P31949 105 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 EIF2B2P49770 351 aaKnown RBP8.37□□□□□ -1.07
CLCF1-202ENST00000533438 APOC4P55056 127 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 HBG1P69891 147 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 HBG2P69892 147 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 NHLH2Q02577 135 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 LGALSLQ3ZCW2 172 aaPredicted RBP8.37□□□□□ -1.07
CLCF1-202ENST00000533438 Q6ZWC4 215 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 C9orf62Q8N4C0 152 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 KCNRGQ8N5I3 272 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 PINX1Q96BK5 328 aaKnown RBP8.37□□□□□ -1.07
CLCF1-202ENST00000533438 RNF2Q99496 336 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 GGACTQ9BVM4 153 aa8.37□□□□□ -1.07
CLCF1-202ENST00000533438 KIR2DL5BA0A0G2JN68 375 aa8.36□□□□□ -1.07
CLCF1-202ENST00000533438 KIR2DL5BA0A0G2JPC4 375 aa8.36□□□□□ -1.07
CLCF1-202ENST00000533438 RPS10-NUDT3A0A1W2PQS6 291 aa8.36□□□□□ -1.07
CLCF1-202ENST00000533438 FNDC10F2Z333 226 aa8.36□□□□□ -1.07
CLCF1-202ENST00000533438 UBE2CO00762 179 aa8.36□□□□□ -1.07
CLCF1-202ENST00000533438 GNG7O60262 68 aa8.36□□□□□ -1.07
CLCF1-202ENST00000533438 JTBO76095 146 aa8.36□□□□□ -1.07
CLCF1-202ENST00000533438 IGHV3-48P01763 117 aa8.36□□□□□ -1.07
CLCF1-202ENST00000533438 BMI1P35226 326 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms