RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 BLOC1S1P78537 153 aa12.34□□□□□ -0.43
TRIM3-213ENST00000533309 LYPD6BQ8NI32 183 aa12.34□□□□□ -0.43
TRIM3-213ENST00000533309 TMEM37Q8WXS4 190 aa12.34□□□□□ -0.43
TRIM3-213ENST00000533309 SLC25A22Q9H936 323 aa12.34□□□□□ -0.43
TRIM3-213ENST00000533309 TGOLN2O43493 480 aa12.33□□□□□ -0.43
TRIM3-213ENST00000533309 TRBV12-3P01733 135 aa12.33□□□□□ -0.43
TRIM3-213ENST00000533309 RD3LP0DJH9 198 aa12.33□□□□□ -0.43
TRIM3-213ENST00000533309 ZNF343Q6P1L6 599 aa12.33□□□□□ -0.43
TRIM3-213ENST00000533309 FAM122CQ6P4D5 195 aa12.33□□□□□ -0.43
TRIM3-213ENST00000533309 PATE2Q6UY27 113 aa12.33□□□□□ -0.43
TRIM3-213ENST00000533309 SEPSECSQ9HD40 501 aaKnown RBP12.33□□□□□ -0.43
TRIM3-213ENST00000533309 GAR1Q9NY12 217 aaKnown RBP12.33□□□□□ -0.43
TRIM3-213ENST00000533309 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.33□□□□□ -0.44
TRIM3-213ENST00000533309 PPP5D1E7EU14 171 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 FABP1P07148 127 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 PLP1P60201 277 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 TCTEX1D4Q5JR98 221 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 SPATA31B1PQ5VZV4 182 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 SPSB3Q6PJ21 355 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 COMMD1Q8N668 190 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 ZNF491Q8N8L2 437 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 MBD3L1Q8WWY6 194 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 RAB24Q969Q5 203 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 DOK5Q9P104 306 aa12.33□□□□□ -0.44
TRIM3-213ENST00000533309 CTXND1A0A1B0GTU2 59 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 LINC00862A6NCI5 91 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 TEX46H3BTG2 121 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 NUPL2O15504 423 aaKnown RBP12.32□□□□□ -0.44
TRIM3-213ENST00000533309 OR2C1O95371 312 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 H2AFB1P0C5Y9 115 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 OR5G3P0C626 314 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 CDC34P49427 236 aaPredicted RBP12.32□□□□□ -0.44
TRIM3-213ENST00000533309 OR5AU1Q8NGC0 362 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 OR4X2Q8NGF9 303 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 OR51G1Q8NGK1 321 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 ACTR3CQ9C0K3 210 aaPredicted RBP12.32□□□□□ -0.44
TRIM3-213ENST00000533309 HRH4Q9H3N8 390 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 GNB4Q9HAV0 340 aa12.32□□□□□ -0.44
TRIM3-213ENST00000533309 WI2-2373I1.2A0A1W2PRP0 233 aa12.31□□□□□ -0.44
TRIM3-213ENST00000533309 SCGB2A1O75556 95 aa12.31□□□□□ -0.44
TRIM3-213ENST00000533309 LCN15Q6UWW0 184 aa12.31□□□□□ -0.44
TRIM3-213ENST00000533309 GATAD1Q8WUU5 269 aa12.31□□□□□ -0.44
TRIM3-213ENST00000533309 SFT2D1Q8WV19 159 aa12.31□□□□□ -0.44
TRIM3-213ENST00000533309 DNAJC4Q9NNZ3 241 aa12.31□□□□□ -0.44
TRIM3-213ENST00000533309 TRAV1-1A0A0B4J248 108 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 IGHV3-35A0A0C4DH35 117 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 HMGB3O15347 200 aaKnown RBP12.3□□□□□ -0.44
TRIM3-213ENST00000533309 COX7A2P2O60397 106 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 IL4P05112 153 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 ORM2P19652 201 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 ARL3P36405 182 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 LYZP61626 148 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 RHOBP62745 196 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 FAM78BQ5VT40 261 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 MORN5Q5VZ52 161 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 ZNF600Q6ZNG1 722 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 OR1B1Q8NGR6 318 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 RNF125Q96EQ8 232 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 UHRF2Q96PU4 802 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 OR5B12Q96R08 314 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 PFDN5Q99471 154 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 C19orf24Q9BVV8 132 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 ZFAND3Q9H8U3 227 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 FUT9Q9Y231 359 aa12.3□□□□□ -0.44
TRIM3-213ENST00000533309 PUS1Q9Y606 427 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRIM3-213ENST00000533309 A0A1B0GV50 99 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 A0A1W2PPV4 95 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 ANKRD34BA5PLL1 514 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 BMPR1BO00238 502 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 CCL20P78556 96 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 USF2Q15853 346 aaPredicted RBP12.29□□□□□ -0.44
TRIM3-213ENST00000533309 C10orf113Q5VZT2 155 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 MIR17HGQ75NE6 70 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 OR1L4Q8NGR5 311 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 Q8WTZ3 238 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 UBE2E2Q96LR5 201 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 MED9Q9NWA0 146 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 MRPL27Q9P0M9 148 aaKnown RBP12.29□□□□□ -0.44
TRIM3-213ENST00000533309 ATRQ13535 2644 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 ELOA3CA0A087WX78 387 aaPredicted RBP12.29□□□□□ -0.44
TRIM3-213ENST00000533309 HYPMO75409 117 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 FGF8P55075 233 aaPredicted RBP12.29□□□□□ -0.44
TRIM3-213ENST00000533309 SLC7A5P1Q8MH63 180 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 OR4F5Q8NH21 305 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 PBDC1Q9BVG4 233 aa12.29□□□□□ -0.44
TRIM3-213ENST00000533309 LGALS1P09382 135 aaKnown RBP12.28□□□□□ -0.44
TRIM3-213ENST00000533309 STAG3L2P0CL84 134 aa12.28□□□□□ -0.44
TRIM3-213ENST00000533309 STAG3L3P0CL85 134 aa12.28□□□□□ -0.44
TRIM3-213ENST00000533309 PROK1P58294 105 aa12.28□□□□□ -0.44
TRIM3-213ENST00000533309 TOMM20LQ6UXN7 152 aa12.28□□□□□ -0.44
TRIM3-213ENST00000533309 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
TRIM3-213ENST00000533309 MRPL32Q9BYC8 188 aaKnown RBP12.28□□□□□ -0.44
TRIM3-213ENST00000533309 PEF1Q9UBV8 284 aaKnown RBP12.28□□□□□ -0.44
TRIM3-213ENST00000533309 HBE1P02100 147 aa12.27□□□□□ -0.44
TRIM3-213ENST00000533309 RELQ04864 619 aaPredicted RBP12.27□□□□□ -0.44
TRIM3-213ENST00000533309 NDUFA5Q16718 116 aa12.27□□□□□ -0.44
TRIM3-213ENST00000533309 FAM209BQ5JX69 171 aa12.27□□□□□ -0.44
TRIM3-213ENST00000533309 HIST2H2BDQ6DRA6 164 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms