RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 CST7O76096 145 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 FABP1P07148 127 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 IGLC1P0CG04 106 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 RPL12P30050 165 aaKnown RBP8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 SULT1A1P50225 295 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 ELLP55199 621 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 DLK1P80370 383 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 TIGITQ495A1 244 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 ALKAL2Q6UX46 152 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 UNQ9165/PRO28630Q6UXU0 137 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 BAP18Q8IXM2 172 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 TMEM217Q8N7C4 229 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 RNF141Q8WVD5 230 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 C20orf24Q9BUV8 137 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 NPVFQ9HCQ7 196 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 VWFP04275 2813 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 FNDC10F2Z333 226 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 K7EMT4 169 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 SAP30O75446 220 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 CFDP00746 253 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 IGKV1-17P01599 117 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 RD3LP0DJH9 198 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 YPEL3P61236 119 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 HBG1P69891 147 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 HBG2P69892 147 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 AKR1C1Q04828 323 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 ARL16Q0P5N6 197 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 ATP6V1FQ16864 119 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 TM4SF20Q53R12 229 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 TOMM20LQ6UXN7 152 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 TMEM144Q7Z5S9 345 aa8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 PUS1Q9Y606 427 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRAPPC4-211ENST00000533012 IGSF23A1L1A6 192 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 C2orf70A6NJV1 201 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 KRBOX1C9JBD0 128 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 CSN3P07498 182 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 FOLR2P14207 255 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 CBLN1P23435 193 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 EWSR1Q01844 656 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 BAXQ07812 192 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 SLC38A11Q08AI6 406 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 ZNF266Q14584 549 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 IL34Q6ZMJ4 242 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 HAPLN4Q86UW8 402 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 THAP8Q8NA92 274 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 TMEM190Q8WZ59 177 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 MARC2Q969Z3 335 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 TRGV9Q99603 122 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 GINS3Q9BRX5 216 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 DAZ1Q9NQZ3 744 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 SIGLEC8Q9NYZ4 499 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 MRPL27Q9P0M9 148 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 ZMAT5Q9UDW3 170 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 CMYA5Q8N3K9 4069 aa8.56□□□□□ -1.04
TRAPPC4-211ENST00000533012 IGKV1D-37A0A075B6S9 117 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 TMEM213A2RRL7 107 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 A8MWP6 167 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 G3V4G9 280 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 TEX46H3BTG2 121 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 TOMM40O96008 361 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 NMBP08949 121 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 PSG1P11464 419 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 BLOC1S1P78537 153 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 NHLH2Q02577 135 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 ZNF90Q03938 601 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 SAMD5Q5TGI4 173 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 TEPPQ6URK8 271 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 UQCC3Q6UW78 93 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 CCDC28AQ8IWP9 274 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 EIF4E3Q8N5X7 224 aaKnown RBP8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 SAT2Q96F10 170 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 UQCC1Q9NVA1 299 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 PKD1L1Q8TDX9 2849 aa8.55□□□□□ -1.04
TRAPPC4-211ENST00000533012 IGKV1OR2-108A0A075B7D4 117 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 ZNF207O43670 478 aaKnown RBP8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 C8orf88P0DMB2 117 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 NPPCP23582 126 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 RAB5CP51148 216 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 RAB31Q13636 194 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 OR51G1Q8NGK1 321 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 OR5C1Q8NGR4 320 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 DYNLRB2Q8TF09 96 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 ZNF414Q96IQ9 312 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 TMEM147Q9BVK8 224 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 ZFAND3Q9H8U3 227 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 WNK1Q9H4A3 2382 aa8.54□□□□□ -1.04
TRAPPC4-211ENST00000533012 RAB19A4D1S5 217 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 WIPF1O43516 503 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 IL4P05112 153 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 BMI1P35226 326 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 VWC2Q2TAL6 325 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 ADAMTSL5Q6ZMM2 481 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 CYP2G1PQ6ZSU1 146 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 BPIFCQ8NFQ6 507 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 NARS2Q96I59 477 aaKnown RBP8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 METTL26Q96S19 204 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 TECRQ9NZ01 308 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 251.1 ms