RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 C7orf50Q9BRJ6 194 aaKnown RBP12.68□□□□□ -0.38
PHRF1-204ENST00000532550 MAGT1Q9H0U3 335 aa12.68□□□□□ -0.38
PHRF1-204ENST00000532550 PFDN2Q9UHV9 154 aa12.68□□□□□ -0.38
PHRF1-204ENST00000532550 WRBO00258 174 aa12.67□□□□□ -0.38
PHRF1-204ENST00000532550 FABP1P07148 127 aa12.67□□□□□ -0.38
PHRF1-204ENST00000532550 COQ8AQ8NI60 647 aa12.67□□□□□ -0.38
PHRF1-204ENST00000532550 GATAD1Q8WUU5 269 aa12.67□□□□□ -0.38
PHRF1-204ENST00000532550 SDHCQ99643 169 aaPredicted RBP12.67□□□□□ -0.38
PHRF1-204ENST00000532550 FLVCR2Q9UPI3 526 aa12.67□□□□□ -0.38
PHRF1-204ENST00000532550 AGRNO00468 2067 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 BUB3O43684 328 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 IFNA21P01568 189 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 OR4E1P0C645 316 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 TMEM217Q8N7C4 229 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 DCANP1Q8TF63 244 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 RNF125Q96EQ8 232 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 RARRES2Q99969 163 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 PBDC1Q9BVG4 233 aa12.66□□□□□ -0.38
PHRF1-204ENST00000532550 SNRPGP15A8MWD9 76 aa12.65□□□□□ -0.38
PHRF1-204ENST00000532550 JTBO76095 146 aa12.65□□□□□ -0.38
PHRF1-204ENST00000532550 CA1P00915 261 aaPredicted RBP12.65□□□□□ -0.38
PHRF1-204ENST00000532550 ZNF688P0C7X2 276 aa12.65□□□□□ -0.38
PHRF1-204ENST00000532550 IL7P13232 177 aa12.65□□□□□ -0.38
PHRF1-204ENST00000532550 NUP62P37198 522 aaPredicted RBP12.65□□□□□ -0.38
PHRF1-204ENST00000532550 ZNF90Q03938 601 aa12.65□□□□□ -0.38
PHRF1-204ENST00000532550 CNPY1Q3B7I2 92 aa12.65□□□□□ -0.38
PHRF1-204ENST00000532550 C4orf46Q504U0 113 aa12.65□□□□□ -0.38
PHRF1-204ENST00000532550 IGKV1D-37A0A075B6S9 117 aa12.64□□□□□ -0.39
PHRF1-204ENST00000532550 CXorf65A6NEN9 183 aa12.64□□□□□ -0.39
PHRF1-204ENST00000532550 ADAP1O75689 374 aa12.64□□□□□ -0.39
PHRF1-204ENST00000532550 SPANXN5Q5MJ07 72 aa12.64□□□□□ -0.39
PHRF1-204ENST00000532550 SIGLEC15Q6ZMC9 328 aa12.64□□□□□ -0.39
PHRF1-204ENST00000532550 OR11H2Q8NH07 326 aa12.64□□□□□ -0.39
PHRF1-204ENST00000532550 SACSQ9NZJ4 4579 aa12.63□□□□□ -0.39
PHRF1-204ENST00000532550 ATF4P18848 351 aaPredicted RBP12.63□□□□□ -0.39
PHRF1-204ENST00000532550 ANXA7P20073 488 aaKnown RBP12.63□□□□□ -0.39
PHRF1-204ENST00000532550 SNRPD3P62318 126 aaKnown RBP12.63□□□□□ -0.39
PHRF1-204ENST00000532550 ID3Q02535 119 aa12.63□□□□□ -0.39
PHRF1-204ENST00000532550 PMS2P11Q13670 270 aa12.63□□□□□ -0.39
PHRF1-204ENST00000532550 OR8G2PQ6IF36 304 aa12.63□□□□□ -0.39
PHRF1-204ENST00000532550 TRGV9Q99603 122 aa12.63□□□□□ -0.39
PHRF1-204ENST00000532550 NRN1Q9NPD7 142 aa12.63□□□□□ -0.39
PHRF1-204ENST00000532550 STRAPQ9Y3F4 350 aaKnown RBP12.63□□□□□ -0.39
PHRF1-204ENST00000532550 KNCNA6PVL3 124 aa12.62□□□□□ -0.39
PHRF1-204ENST00000532550 BTCP35070 178 aa12.62□□□□□ -0.39
PHRF1-204ENST00000532550 NKX2-1P43699 371 aaPredicted RBP12.62□□□□□ -0.39
PHRF1-204ENST00000532550 LYZP61626 148 aa12.62□□□□□ -0.39
PHRF1-204ENST00000532550 EWSR1Q01844 656 aaKnown RBP eCLIP12.62□□□□□ -0.39
PHRF1-204ENST00000532550 OR2F1Q13607 317 aa12.62□□□□□ -0.39
PHRF1-204ENST00000532550 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
PHRF1-204ENST00000532550 ACTL10Q5JWF8 245 aa12.62□□□□□ -0.39
PHRF1-204ENST00000532550 MORN3Q6PF18 240 aaPredicted RBP12.62□□□□□ -0.39
PHRF1-204ENST00000532550 PPP1R14BQ96C90 147 aa12.62□□□□□ -0.39
PHRF1-204ENST00000532550 LYSTQ99698 3801 aa12.62□□□□□ -0.39
PHRF1-204ENST00000532550 SEPSECSQ9HD40 501 aaKnown RBP12.62□□□□□ -0.39
PHRF1-204ENST00000532550 CFDP00746 253 aaPredicted RBP12.61□□□□□ -0.39
PHRF1-204ENST00000532550 POLR2GP62487 172 aaKnown RBP eCLIP12.61□□□□□ -0.39
PHRF1-204ENST00000532550 TMEM41BQ5BJD5 291 aa12.61□□□□□ -0.39
PHRF1-204ENST00000532550 TRPT1Q86TN4 253 aaKnown RBP12.61□□□□□ -0.39
PHRF1-204ENST00000532550 THAP8Q8NA92 274 aa12.61□□□□□ -0.39
PHRF1-204ENST00000532550 RAB40CQ96S21 281 aa12.61□□□□□ -0.39
PHRF1-204ENST00000532550 PSENENQ9NZ42 101 aa12.61□□□□□ -0.39
PHRF1-204ENST00000532550 FBXL17Q9UF56 701 aa12.61□□□□□ -0.39
PHRF1-204ENST00000532550 H3BP45 60 aa12.6□□□□□ -0.39
PHRF1-204ENST00000532550 SPP1P10451 314 aa12.6□□□□□ -0.39
PHRF1-204ENST00000532550 OR4D5Q8NGN0 318 aa12.6□□□□□ -0.39
PHRF1-204ENST00000532550 IGKV1OR2-108A0A075B7D4 117 aa12.59□□□□□ -0.39
PHRF1-204ENST00000532550 NUPR2A6NF83 97 aa12.59□□□□□ -0.39
PHRF1-204ENST00000532550 PRSS46E5RG02 174 aa12.59□□□□□ -0.39
PHRF1-204ENST00000532550 PLA2G10O15496 165 aa12.59□□□□□ -0.39
PHRF1-204ENST00000532550 LYRM1O43325 122 aa12.59□□□□□ -0.39
PHRF1-204ENST00000532550 AKR1C1Q04828 323 aa12.59□□□□□ -0.39
PHRF1-204ENST00000532550 C1orf194Q5T5A4 169 aa12.59□□□□□ -0.39
PHRF1-204ENST00000532550 SMIM8Q96KF7 97 aa12.59□□□□□ -0.39
PHRF1-204ENST00000532550 SSSCA1O60232 199 aa12.58□□□□□ -0.4
PHRF1-204ENST00000532550 ID1P41134 155 aa12.58□□□□□ -0.4
PHRF1-204ENST00000532550 IAH1Q2TAA2 248 aaPredicted RBP12.58□□□□□ -0.4
PHRF1-204ENST00000532550 CEMP1Q6PRD7 247 aaPredicted RBP12.58□□□□□ -0.4
PHRF1-204ENST00000532550 OR8I2Q8N0Y5 310 aa12.58□□□□□ -0.4
PHRF1-204ENST00000532550 BPIFCQ8NFQ6 507 aa12.58□□□□□ -0.4
PHRF1-204ENST00000532550 MITD1Q8WV92 249 aa12.58□□□□□ -0.4
PHRF1-204ENST00000532550 C20orf85Q9H1P6 137 aa12.58□□□□□ -0.4
PHRF1-204ENST00000532550 GSKIPQ9P0R6 139 aa12.58□□□□□ -0.4
PHRF1-204ENST00000532550 KLK5Q9Y337 293 aaPredicted RBP12.58□□□□□ -0.4
PHRF1-204ENST00000532550 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
PHRF1-204ENST00000532550 SCGB1D2O95969 90 aa12.57□□□□□ -0.4
PHRF1-204ENST00000532550 TCRBP04435 133 aa12.57□□□□□ -0.4
PHRF1-204ENST00000532550 GIG44P09565 113 aaPredicted RBP12.57□□□□□ -0.4
PHRF1-204ENST00000532550 S100A7P31151 101 aa12.57□□□□□ -0.4
PHRF1-204ENST00000532550 NUTF2P61970 127 aaKnown RBP12.57□□□□□ -0.4
PHRF1-204ENST00000532550 C11orf45Q8TAV5 145 aa12.57□□□□□ -0.4
PHRF1-204ENST00000532550 ORM2P19652 201 aa12.56□□□□□ -0.4
PHRF1-204ENST00000532550 ACOT7LQ6ZUV0 252 aa12.56□□□□□ -0.4
PHRF1-204ENST00000532550 TMEM144Q7Z5S9 345 aa12.56□□□□□ -0.4
PHRF1-204ENST00000532550 ZBTB8BQ8NAP8 495 aaPredicted RBP12.56□□□□□ -0.4
PHRF1-204ENST00000532550 LINC00052Q96N35 136 aa12.56□□□□□ -0.4
PHRF1-204ENST00000532550 CCDC32Q9BV29 185 aa12.56□□□□□ -0.4
PHRF1-204ENST00000532550 MFFQ9GZY8 342 aa12.56□□□□□ -0.4
PHRF1-204ENST00000532550 C11orf68Q9H3H3 251 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms