RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 FNDC10F2Z333 226 aa6.74□□□□□ -1.33
CTNND1-231ENST00000532463 PROP1O75360 226 aa6.74□□□□□ -1.33
CTNND1-231ENST00000532463 SLC25A16P16260 332 aa6.74□□□□□ -1.33
CTNND1-231ENST00000532463 ZNF138P52744 262 aa6.74□□□□□ -1.33
CTNND1-231ENST00000532463 FAM90A1Q86YD7 464 aa6.74□□□□□ -1.33
CTNND1-231ENST00000532463 IGFBPL1Q8WX77 278 aa6.74□□□□□ -1.33
CTNND1-231ENST00000532463 DEPPQ9NTK1 212 aa6.74□□□□□ -1.33
CTNND1-231ENST00000532463 FAM240AA0A1B0GVK7 77 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 HRKO00198 91 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 LTBRP36941 435 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 PRCDQ00LT1 54 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 PAX8Q06710 450 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 ANXA2RQ3ZCQ2 193 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 RTBDNQ9BSG5 229 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-231ENST00000532463 MYO5AQ9Y4I1 1855 aaKnown RBP6.73□□□□□ -1.33
CTNND1-231ENST00000532463 PRB1P04280 392 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 CDKN1BP46527 198 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 WDR83OSQ9Y284 106 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 N4BP2Q86UW6 1770 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-231ENST00000532463 A0A0A6YYD4 124 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
CTNND1-231ENST00000532463 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 BMPERQ8N8U9 685 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 WFDC12Q8WWY7 111 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 LINC00477Q96M19 166 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 APC2O95996 2303 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 NRXN3Q9Y4C0 1643 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 ORMDL1Q9P0S3 153 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 ZNF319Q9P2F9 582 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 NRN1LQ496H8 165 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 C14orf178Q8N769 122 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-231ENST00000532463 C18orf12Q96KH6 178 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 LINC00312Q9Y6C7 94 aa6.73□□□□□ -1.33
CTNND1-231ENST00000532463 IGKV2-40A0A087WW87 121 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-231ENST00000532463 SRRM4A7MD48 611 aaKnown RBP6.72□□□□□ -1.33
CTNND1-231ENST00000532463 IGKV2D-40P01614 121 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-231ENST00000532463 IGLC2P0DOY2 106 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 IGLC3P0DOY3 106 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 MRPL23Q16540 153 aaKnown RBP6.72□□□□□ -1.33
CTNND1-231ENST00000532463 C9orf139Q6ZV77 190 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 C2CD4DB7Z1M9 353 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 HLA-DRB4P13762 266 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 NEU4Q8WWR8 484 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-231ENST00000532463 HLA-DRB4X5D2U9 266 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 TTC3P53804 2025 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 H3BMG7 143 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 FBLN5Q9UBX5 448 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 POLR3KQ9Y2Y1 108 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-231ENST00000532463 SH2D1AO60880 128 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 CRYGCP07315 174 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 CCL4P13236 92 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 COLCA1Q6ZS62 124 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 COX14Q96I36 57 aa6.72□□□□□ -1.33
CTNND1-231ENST00000532463 RNF126Q9BV68 326 aa6.71□□□□□ -1.33
CTNND1-231ENST00000532463 A0A1B0GTI1 187 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 THBDP07204 575 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 BVES-AS1Q5T3Y7 98 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 ZFP2Q6ZN57 461 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 AGMATQ9BSE5 352 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 NDUFA12Q9UI09 145 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 SNRNP200O75643 2136 aaKnown RBP6.71□□□□□ -1.34
CTNND1-231ENST00000532463 BAALC-AS2P0C853 105 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 C1QTNF5Q9BXJ0 243 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 A0A0B4J2C4 111 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 Q0VG73 95 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 CEND1Q8N111 149 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 DEFB104AQ8WTQ1 72 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 C7orf69Q9H7B7 122 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 TP53TG1Q9Y2A0 90 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 EVPLQ92817 2033 aa6.71□□□□□ -1.34
CTNND1-231ENST00000532463 UBR2Q8IWV8 1755 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 NUP98P52948 1817 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 IGHV1OR15-9A0A0B4J2B8 117 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 NXPH4O95158 308 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 CGB7P0DN87 165 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 PCOLCEQ15113 449 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 REPIN1Q9BWE0 567 aaKnown RBP6.7□□□□□ -1.34
CTNND1-231ENST00000532463 RP1P56715 2156 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 FAM236AA0A1B0GUQ0 79 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 FAM236BA0A1B0GV22 79 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 YPEL1O60688 119 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 NPYP01303 97 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 GZMMP51124 257 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 SUPT4H1P63272 117 aaKnown RBP6.7□□□□□ -1.34
CTNND1-231ENST00000532463 IL17RELQ6ZVW7 336 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 FBLIM1Q8WUP2 373 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 YPEL2Q96QA6 119 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 GFRA4Q9GZZ7 299 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 SCN11AQ9UI33 1791 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 PMS2P5A8MQ11 134 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 COX8AP10176 69 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 PKIGQ9Y2B9 76 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 TRBV25-1A0A075B6N4 114 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 MCRIP2Q9BUT9 160 aaKnown RBP6.7□□□□□ -1.34
CTNND1-231ENST00000532463 DTX4Q9Y2E6 619 aa6.7□□□□□ -1.34
CTNND1-231ENST00000532463 TEX48A0A1B0GUV7 120 aa6.69□□□□□ -1.34
CTNND1-231ENST00000532463 IGKV1D-16P01601 117 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms