RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 IFT22Q9H7X7 185 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 VPREB3Q9UKI3 123 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 KIAA1549LQ6ZVL6 1849 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 CEP192Q8TEP8 1941 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 GCGP01275 180 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 BTF3P20290 206 aaKnown RBP6.43□□□□□ -1.38
CTNND1-230ENST00000532245 LEPP41159 167 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 SMAGPQ0VAQ4 97 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 FBLN7Q53RD9 439 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 OR11H4Q8NGC9 324 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 HIST1H2BAQ96A08 127 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 RHPN1-AS1Q9BWJ2 59 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 C2orf83Q53S99 150 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 SDF2L1Q9HCN8 221 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 ANKHD1Q8IWZ3 2542 aaKnown RBP6.43□□□□□ -1.38
CTNND1-230ENST00000532245 IGKV1-6A0A0C4DH72 117 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 M0R2Z0 102 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 CRISP2P16562 243 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 C19orf54Q5BKX5 351 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 CENPWQ5EE01 88 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 UBE2DNLQ8IWF7 75 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 TRGC1P0CF51 173 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 CMC4P56277 68 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-230ENST00000532245 RIPPLY3P57055 190 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 GCSAMLQ5JQS6 135 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 EIF4E3Q8N5X7 224 aaKnown RBP6.42□□□□□ -1.38
CTNND1-230ENST00000532245 CLRN3Q8NCR9 226 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 WFDC11Q8NEX6 87 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 UBE2E2Q96LR5 201 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.42□□□□□ -1.38
CTNND1-230ENST00000532245 TRAV5A0A0B4J249 113 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 B4DEV8 164 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 PEX7O00628 323 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 DANCRP0C864 163 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 SRSF4Q08170 494 aaKnown RBP6.42□□□□□ -1.38
CTNND1-230ENST00000532245 MYOZ3Q8TDC0 251 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 C7orf77A4D0Y5 90 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 BTCP35070 178 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 FAM3BP58499 235 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-230ENST00000532245 ID3Q02535 119 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 LHFPL1Q86WI0 220 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 OR5AN1Q8NGI8 311 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 SCRT1Q9BWW7 348 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 FCN3O75636 299 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 Q1RN00 199 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 C11orf53Q8IXP5 236 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 DENND4AQ7Z401 1863 aa6.42□□□□□ -1.38
CTNND1-230ENST00000532245 MLANAQ16655 118 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 TMEM95Q3KNT9 176 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 OR8A1Q8NGG7 326 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 DAZ1Q9NQZ3 744 aaKnown RBP6.41□□□□□ -1.38
CTNND1-230ENST00000532245 NOTCH3Q9UM47 2321 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 A0A1W2PPI3 338 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 PMS2P5A8MQ11 134 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 PAX1P15863 534 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 MDKP21741 143 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-230ENST00000532245 RPL29P47914 159 aaKnown RBP6.41□□□□□ -1.38
CTNND1-230ENST00000532245 ZNF833PQ6ZTB9 187 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 DTX2Q86UW9 622 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 MRAPQ8TCY5 172 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 ATG101Q9BSB4 218 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 TNFRSF18Q9Y5U5 241 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 OVOL1O14753 267 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 ATP5G3P48201 142 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 KLK15Q9H2R5 256 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 ATRXP46100 2492 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 CENPVL3A0A0U1RRI6 287 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 SCO2A0A1W2PP80 73 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 CRXO43186 299 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-230ENST00000532245 ZNF134P52741 427 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 IGFL4Q6B9Z1 124 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 OR4D5Q8NGN0 318 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 PARLQ9H300 379 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 OTORQ9NRC9 128 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 TRGV4A0A0C4DH28 118 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 SNCGO76070 127 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 NDUFB8O95169 186 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 TREML4Q6UXN2 200 aa6.41□□□□□ -1.38
CTNND1-230ENST00000532245 FAM74A7A6NL05 159 aa6.4□□□□□ -1.38
CTNND1-230ENST00000532245 PTTG1IPP53801 180 aa6.4□□□□□ -1.38
CTNND1-230ENST00000532245 COX19Q49B96 90 aa6.4□□□□□ -1.38
CTNND1-230ENST00000532245 SLC25A39Q9BZJ4 359 aaPredicted RBP6.4□□□□□ -1.38
CTNND1-230ENST00000532245 TPSG1Q9NRR2 321 aa6.4□□□□□ -1.38
CTNND1-230ENST00000532245 CD5P06127 495 aa6.4□□□□□ -1.38
CTNND1-230ENST00000532245 SUPT4H1P63272 117 aaKnown RBP6.4□□□□□ -1.38
CTNND1-230ENST00000532245 C15orf65H3BRN8 121 aa6.4□□□□□ -1.39
CTNND1-230ENST00000532245 ITGB1BP1O14713 200 aa6.4□□□□□ -1.39
CTNND1-230ENST00000532245 ZFP36P26651 326 aaKnown RBP6.4□□□□□ -1.39
CTNND1-230ENST00000532245 Q6ZS49 121 aa6.4□□□□□ -1.39
CTNND1-230ENST00000532245 STPG2Q8N412 459 aa6.4□□□□□ -1.39
CTNND1-230ENST00000532245 PACRGQ96M98 296 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-230ENST00000532245 E9PQ18 207 aa6.4□□□□□ -1.39
CTNND1-230ENST00000532245 DEFB131AP59861 70 aa6.4□□□□□ -1.39
CTNND1-230ENST00000532245 LCN12Q6JVE5 192 aa6.4□□□□□ -1.39
CTNND1-230ENST00000532245 CCDC168Q8NDH2 2452 aa6.4□□□□□ -1.39
CTNND1-230ENST00000532245 NUDT3O95989 172 aa6.39□□□□□ -1.39
CTNND1-230ENST00000532245 FMC1Q96HJ9 113 aa6.39□□□□□ -1.39
CTNND1-230ENST00000532245 IGKV2-40A0A087WW87 121 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-230ENST00000532245 IGKV2D-40P01614 121 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-230ENST00000532245 FOXL1Q12952 345 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms