RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	OR51G1	Q8NGK1	321 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	OR2T29	Q8NH02	315 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	PP6455	Q8WZ26	134 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	SLC25A38	Q96DW6	304 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	SMIM19	Q96E16	107 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	PYURF	Q96I23	114 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	C20orf85	Q9H1P6	137 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	C11orf68	Q9H3H3	251 aa	Known RBP	4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	FAM240A	A0A1B0GVK7	77 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	C16orf90	A8MZG2	172 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	C11orf94	C9JXX5	98 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867		F5H768	121 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867		H0YJX3	145 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	AGPAT2	O15120	278 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	UPK1B	O75841	260 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	DCTN3	O75935	186 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	SOX14	O95416	240 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	PTTG1	O95997	202 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	FABP1	P07148	127 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	CD37	P11049	281 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	ATF1	P18846	271 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	MYL9	P24844	172 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	MXD1	Q05195	221 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	SYT6	Q5T7P8	510 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	GLYAT	Q6IB77	296 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	ARRDC1	Q8N5I2	433 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	VN1R17P	Q8TDU5	208 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	FGGY	Q96C11	551 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	MRAP2	Q96G30	205 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	USMG5	Q96IX5	58 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	TMEM56	Q96MV1	263 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	RDH12	Q96NR8	316 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	HOPX	Q9BPY8	73 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	RNF126	Q9BV68	326 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	FBXL15	Q9H469	300 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	SAR1A	Q9NR31	198 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	COMMD9	Q9P000	198 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	TMEM14A	Q9Y6G1	99 aa		4.05	□□□□□ -1.76
PUM1-222	ENST00000531867	IGLV4-3	A0A075B6K6	122 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	C2orf70	A6NJV1	201 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	MPTX1	A8MV57	137 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	IGLL5	B9A064	214 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	FABP3	P05413	133 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	CFC1B	P0CG36	223 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	CFC1	P0CG37	223 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	INAFM2	P0DMQ5	153 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	FOLR2	P14207	255 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	RCC1	P18754	421 aa	Predicted RBP	4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	GALR1	P47211	349 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	GUCA2B	Q16661	112 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	ACSM3	Q53FZ2	586 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	C1orf146	Q5VVC0	180 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	TMEM61	Q8N0U2	210 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	AQP11	Q8NBQ7	271 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	ZNF680	Q8NEM1	530 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	OR10W1	Q8NGF6	305 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	ARL11	Q969Q4	196 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	ADAT3	Q96EY9	351 aa	Predicted RBP	4.04	□□□□□ -1.76
PUM1-222	ENST00000531867		Q96MT0	163 aa		4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	FAM103A1	Q9BTL3	118 aa	Known RBP	4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	MRPL20	Q9BYC9	149 aa	Known RBP	4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	PARP12	Q9H0J9	701 aa	Known RBP	4.04	□□□□□ -1.76
PUM1-222	ENST00000531867	IGHV1OR15-1	A0A075B7D0	117 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	IGHV3-43	A0A0B4J1X8	118 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	TRAV8-4	A0A0B4J246	113 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867		A0A0G2JND7	137 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867		A0A0G2JRQ6	117 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867		M0R2N4	97 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	LGALS9	O00182	355 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	TCAP	O15273	167 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867		P01737	135 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	TCRB	P04435	133 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	IGHV3-43D	P0DP04	118 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	DTYMK	P23919	212 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	CDK5	Q00535	292 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	ZNF833P	Q6ZTB9	187 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	DTD1	Q8TEA8	209 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	DYNLRB2	Q8TF09	96 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	AP3S1	Q92572	193 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	DGCR14	Q96DF8	476 aa	Known RBP	4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	RNF5	Q99942	180 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	NIPSNAP1	Q9BPW8	284 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	C20orf144	Q9BQM9	153 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	METTL9	Q9H1A3	318 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	ARV1	Q9H2C2	271 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	XCL2	Q9UBD3	114 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	RAB22A	Q9UL26	194 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	ARL2BP	Q9Y2Y0	163 aa		4.03	□□□□□ -1.76
PUM1-222	ENST00000531867	TRAV9-2	A0A087WT02	112 aa		4.02	□□□□□ -1.77
PUM1-222	ENST00000531867	TMEM30CP	A0ZSE6	113 aa		4.02	□□□□□ -1.77
PUM1-222	ENST00000531867	EPM2A	B3EWF7	344 aa		4.02	□□□□□ -1.77
PUM1-222	ENST00000531867	EDF1	O60869	148 aa	Known RBP	4.02	□□□□□ -1.77
PUM1-222	ENST00000531867	CA2	P00918	260 aa		4.02	□□□□□ -1.77
PUM1-222	ENST00000531867	MT-ND4	P03905	459 aa		4.02	□□□□□ -1.77
PUM1-222	ENST00000531867	CD74	P04233	296 aa		4.02	□□□□□ -1.77
PUM1-222	ENST00000531867	HMGN1	P05114	100 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms