RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 C5orf17Q8NAS9 161 aa13.44□□□□□ -0.26
VPS26B-206ENST00000531741 LY6G5BQ8NDX9 201 aa13.44□□□□□ -0.26
VPS26B-206ENST00000531741 TSKUQ8WUA8 353 aa13.44□□□□□ -0.26
VPS26B-206ENST00000531741 KCNS1Q96KK3 526 aa13.44□□□□□ -0.26
VPS26B-206ENST00000531741 GPR82Q96P67 336 aa13.44□□□□□ -0.26
VPS26B-206ENST00000531741 ATG101Q9BSB4 218 aa13.44□□□□□ -0.26
VPS26B-206ENST00000531741 MLST8Q9BVC4 326 aa13.44□□□□□ -0.26
VPS26B-206ENST00000531741 PGPA6NDG6 321 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 ZNF705FA8MVS1 300 aaPredicted RBP13.43□□□□□ -0.26
VPS26B-206ENST00000531741 LYNX1G3V0Z9 82 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 CA1P00915 261 aaPredicted RBP13.43□□□□□ -0.26
VPS26B-206ENST00000531741 ZNF705DP0CH99 300 aaPredicted RBP13.43□□□□□ -0.26
VPS26B-206ENST00000531741 ZNF705BP0CI00 300 aaPredicted RBP13.43□□□□□ -0.26
VPS26B-206ENST00000531741 LYNX1P0DP58 116 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 LINC01560Q8TB33 94 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 SRSF12Q8WXF0 261 aaKnown RBP13.43□□□□□ -0.26
VPS26B-206ENST00000531741 C20orf144Q9BQM9 153 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 SCNM1Q9BWG6 230 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 MALRD1Q5VYJ5 2156 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 PLXNB1O43157 2135 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 FAM87AP0C7U9 286 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 GNG5P63218 68 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 TOMM20LQ6UXN7 152 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 ATP5L2Q7Z4Y8 100 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 NUP35Q8NFH5 326 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 OR8B3Q8NGG8 313 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 FMC1Q96HJ9 113 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 RBM14Q96PK6 669 aaKnown RBP13.43□□□□□ -0.26
VPS26B-206ENST00000531741 OR8B2Q96RD0 313 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 SSBP3Q9BWW4 388 aaPredicted RBP13.43□□□□□ -0.26
VPS26B-206ENST00000531741 TMEM14CQ9P0S9 112 aa13.43□□□□□ -0.26
VPS26B-206ENST00000531741 POLEQ07864 2286 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 A0A1B0GV90 55 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 SIAH2O43255 324 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 ZNF253O75346 499 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 TOMM40O96008 361 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 SNRPCP09234 159 aaKnown RBP13.42□□□□□ -0.26
VPS26B-206ENST00000531741 IGLC1P0CG04 106 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 SRIP30626 198 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 DLX1P56177 255 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 SSTP61278 116 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 KIAA1644Q3SXP7 199 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 ZNF586Q9NXT0 402 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 MRPL27Q9P0M9 148 aaKnown RBP13.42□□□□□ -0.26
VPS26B-206ENST00000531741 HIGD1AQ9Y241 93 aa13.42□□□□□ -0.26
VPS26B-206ENST00000531741 I3L2K1 104 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 LIPFP07098 398 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 CT83Q5H943 113 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 C19orf35Q6ZS72 473 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 MRPL52Q86TS9 123 aaKnown RBP13.41□□□□□ -0.26
VPS26B-206ENST00000531741 BLNKQ8WV28 456 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 FBXL15Q9H469 300 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 ZNF492Q9P255 531 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 A0A1W2PS18 150 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 LTAP01374 205 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 COX7A1P24310 79 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 PRSS22Q9GZN4 317 aa13.41□□□□□ -0.26
VPS26B-206ENST00000531741 OR2J3O76001 311 aa13.4□□□□□ -0.26
VPS26B-206ENST00000531741 CD33P20138 364 aa13.4□□□□□ -0.26
VPS26B-206ENST00000531741 CDKN1AP38936 164 aa13.4□□□□□ -0.26
VPS26B-206ENST00000531741 SLAQ13239 276 aa13.4□□□□□ -0.26
VPS26B-206ENST00000531741 Q9H3A6 140 aa13.4□□□□□ -0.26
VPS26B-206ENST00000531741 TBL2Q9Y4P3 447 aaKnown RBP13.4□□□□□ -0.26
VPS26B-206ENST00000531741 ZNF324O75467 553 aaPredicted RBP13.4□□□□□ -0.27
VPS26B-206ENST00000531741 TCRAP04437 139 aa13.4□□□□□ -0.27
VPS26B-206ENST00000531741 PSG1P11464 419 aa13.4□□□□□ -0.27
VPS26B-206ENST00000531741 KLF5Q13887 457 aaPredicted RBP13.4□□□□□ -0.27
VPS26B-206ENST00000531741 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.27
VPS26B-206ENST00000531741 TMEM68Q96MH6 324 aa13.4□□□□□ -0.27
VPS26B-206ENST00000531741 RCHY1Q96PM5 261 aa13.4□□□□□ -0.27
VPS26B-206ENST00000531741 NEU1Q99519 415 aa13.4□□□□□ -0.27
VPS26B-206ENST00000531741 OTORQ9NRC9 128 aa13.4□□□□□ -0.27
VPS26B-206ENST00000531741 FBXL7Q9UJT9 491 aa13.4□□□□□ -0.27
VPS26B-206ENST00000531741 ATMQ13315 3056 aa13.39□□□□□ -0.27
VPS26B-206ENST00000531741 A0A1B0GXF2 115 aa13.39□□□□□ -0.27
VPS26B-206ENST00000531741 APELAP0DMC3 54 aa13.39□□□□□ -0.27
VPS26B-206ENST00000531741 AMTP48728 403 aa13.39□□□□□ -0.27
VPS26B-206ENST00000531741 NRN1Q9NPD7 142 aa13.39□□□□□ -0.27
VPS26B-206ENST00000531741 SOX21Q9Y651 276 aaPredicted RBP13.39□□□□□ -0.27
VPS26B-206ENST00000531741 IGHV3-21A0A0B4J1V1 117 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 FAM90A27PA6NNH2 459 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 HIGD1CA8MV81 97 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 PRB3Q04118 309 aaPredicted RBP13.38□□□□□ -0.27
VPS26B-206ENST00000531741 PRR27Q6MZM9 219 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 C18orf32Q8TCD1 76 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 RPP21Q9H633 154 aaKnown RBP13.38□□□□□ -0.27
VPS26B-206ENST00000531741 MUC6Q6W4X9 2439 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 C19orf71A6NCJ1 209 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 GDF5OSQ5U4N7 250 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 Q8N976 141 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 RASL11BQ9BPW5 248 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 SLC25A39Q9BZJ4 359 aaPredicted RBP13.38□□□□□ -0.27
VPS26B-206ENST00000531741 WNT10AQ9GZT5 417 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 RAB1BQ9H0U4 201 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 CBLN4Q9NTU7 201 aa13.38□□□□□ -0.27
VPS26B-206ENST00000531741 TRBV6-1A0A0K0K1D8 114 aa13.37□□□□□ -0.27
VPS26B-206ENST00000531741 TIMM23O14925 209 aa13.37□□□□□ -0.27
VPS26B-206ENST00000531741 IGKV1-17P01599 117 aa13.37□□□□□ -0.27
VPS26B-206ENST00000531741 RAB4AP20338 218 aa13.37□□□□□ -0.27
VPS26B-206ENST00000531741 HTR1DP28221 377 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms