RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 VKORC1L1Q8N0U8 176 aa4.73□□□□□ -1.65
CSDE1-213ENST00000530784 OR4S2Q8NH73 311 aa4.73□□□□□ -1.65
CSDE1-213ENST00000530784 EEF1AKMT3Q96AZ1 226 aa4.73□□□□□ -1.65
CSDE1-213ENST00000530784 PHYHIPLQ96FC7 376 aa4.73□□□□□ -1.65
CSDE1-213ENST00000530784 MGLLQ99685 303 aa4.73□□□□□ -1.65
CSDE1-213ENST00000530784 OR51E2Q9H255 320 aa4.73□□□□□ -1.65
CSDE1-213ENST00000530784 DUSP21Q9H596 190 aa4.73□□□□□ -1.65
CSDE1-213ENST00000530784 RBMX2Q9Y388 322 aaKnown RBP4.73□□□□□ -1.65
CSDE1-213ENST00000530784 S4R3C0 116 aa4.73□□□□□ -1.65
CSDE1-213ENST00000530784 SORL1Q92673 2214 aa4.73□□□□□ -1.65
CSDE1-213ENST00000530784 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 TRAV1-2A0A0B4J238 106 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 SLC22A5O76082 557 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 ZNF735P0CB33 412 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 DEFA4P12838 97 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 PGAM2P15259 253 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 HIST1H1BP16401 226 aaKnown RBP4.72□□□□□ -1.65
CSDE1-213ENST00000530784 NFYAP23511 347 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-213ENST00000530784 CRHBPP24387 322 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 PSMB6P28072 239 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 MAS1LP35410 378 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 RPL30P62888 115 aaKnown RBP4.72□□□□□ -1.65
CSDE1-213ENST00000530784 CXCL6P80162 114 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 SSX1Q16384 188 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 OR1L6Q8NGR2 347 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 TMEM167AQ8TBQ9 72 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 TCTEX1D2Q8WW35 142 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 MARC2Q969Z3 335 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 OR2A7Q96R45 310 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 HSD17B10Q99714 261 aaKnown RBP4.72□□□□□ -1.65
CSDE1-213ENST00000530784 ATG5Q9H1Y0 275 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 SLC2A9Q9NRM0 540 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 NDUFA13Q9P0J0 144 aa4.72□□□□□ -1.65
CSDE1-213ENST00000530784 CSMD3Q7Z407 3707 aa4.71□□□□□ -1.65
CSDE1-213ENST00000530784 TRBV7-1A0A0A6YYK4 115 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 TRAV25A0A0B4J276 109 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 IGKV1D-13A0A0B4J2D9 117 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 A0A1B0GW64 132 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 MFSD2BA6NFX1 497 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 ATP6V1G2O95670 118 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 HRASP01112 189 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 HLA-DQB1P01920 261 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 REG1AP05451 166 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 CRYGCP07315 174 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 IGKV1-13P0DP09 117 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 HLA-GP17693 338 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 RAB3BP20337 219 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 APOC4P55056 127 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 AQP4P55087 323 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 RPL8P62917 257 aaKnown RBP4.71□□□□□ -1.66
CSDE1-213ENST00000530784 CDNFQ49AH0 187 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 HACD4Q5VWC8 232 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 CNIH2Q6PI25 160 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 UNQ9165/PRO28630Q6UXU0 137 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 SSX9Q7RTT3 188 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 PRSS48Q7RTY5 328 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 SLC38A6Q8IZM9 456 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 PUSL1Q8N0Z8 303 aaKnown RBP4.71□□□□□ -1.66
CSDE1-213ENST00000530784 PAXXQ9BUH6 204 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 DCSTAMPQ9H295 470 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 NDUFB11Q9NX14 153 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 TAS2R8Q9NYW2 309 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 TP53TG1Q9Y2A0 90 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 UFC1Q9Y3C8 167 aa4.71□□□□□ -1.66
CSDE1-213ENST00000530784 IGLV11-55A0A075B6I3 123 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 TRDV1A0A1B0GX56 115 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 TMEM235A6NFC5 223 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 E7EUB6 86 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 SCGNO76038 276 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 C8orf88P0DMB2 117 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 CTRB1P17538 263 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 GALP22466 123 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 BMI1P35226 326 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 GNG2P59768 71 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 TNFRSF9Q07011 255 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 EIF4EBP1Q13541 118 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-213ENST00000530784 KLK9Q2XQG4 91 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 DEFB135Q30KP9 77 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 CTRB2Q6GPI1 263 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 CEMP1Q6PRD7 247 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-213ENST00000530784 PLET1Q6UQ28 207 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 C2orf66Q6UXQ4 117 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 LYG2Q86SG7 212 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 OR4A5Q8NH83 315 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 HRASLSQ9HDD0 168 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 MRPL27Q9P0M9 148 aaKnown RBP4.7□□□□□ -1.66
CSDE1-213ENST00000530784 PRO0461Q9UI25 63 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 ANXA10Q9UJ72 324 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 KLK9Q9UKQ9 250 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 KLK5Q9Y337 293 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-213ENST00000530784 STRAPQ9Y3F4 350 aaKnown RBP4.7□□□□□ -1.66
CSDE1-213ENST00000530784 LYSTQ99698 3801 aa4.7□□□□□ -1.66
CSDE1-213ENST00000530784 IGHV3-35A0A0C4DH35 117 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 CYB5BO43169 146 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 OR2B8PP59922 312 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 ARPC4P59998 168 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 EWSR1Q01844 656 aaKnown RBP eCLIP4.69□□□□□ -1.66
CSDE1-213ENST00000530784 CATR1Q13166 79 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 MSMO1Q15800 293 aa4.69□□□□□ -1.66
CSDE1-213ENST00000530784 LAMTOR1Q6IAA8 161 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms