RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 OR13C8Q8NGS7 320 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 OR10K1Q8NGX5 313 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 OR5J2Q8NH18 312 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 DNAJC30Q96LL9 226 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 PFDN5Q99471 154 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 NIPSNAP1Q9BPW8 284 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 DOHHQ9BU89 302 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 OR51V1Q9H2C8 321 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 C11orf1Q9H5F2 150 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 TMEM138Q9NPI0 162 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 UQCC1Q9NVA1 299 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 TNFSF18Q9UNG2 199 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 SLC35A3Q9Y2D2 325 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 HDGFL3Q9Y3E1 203 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 V9GYQ6 96 aa2.32□□□□□ -2.04
CASP4-208ENST00000530309 ZFC3H1O60293 1989 aaKnown RBP2.32□□□□□ -2.04
CASP4-208ENST00000530309 STRCP1A6NGW2 1772 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 BAHCC1Q9P281 2608 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 IGHV3-73A0A0B4J1V6 119 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 TRAV1-2A0A0B4J238 106 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 A0A0D9SG52 128 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 A0A1B0GW64 132 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 C1orf196B1AJZ1 125 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 DISC1C4P0D8 188 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 M0QZK8 103 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 NDUFB6O95139 128 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 SIX6O95475 246 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 PPBPP02775 128 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 METTL15P1P0C7V9 234 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 NFYBP25208 207 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 CD200P41217 278 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 CDKN2CP42773 168 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 CAV3P56539 151 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 TSPEAR-AS2P59090 65 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 CDC42P60953 191 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 SKP1P63208 163 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 SELENOWP63302 87 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 DEFA5Q01523 94 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 JOSD1Q15040 202 aaPredicted RBP2.31□□□□□ -2.04
CASP4-208ENST00000530309 PEA15Q15121 130 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 SS18Q15532 418 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 RNASE10Q5GAN6 216 aaKnown RBP2.31□□□□□ -2.04
CASP4-208ENST00000530309 SCIMPQ6UWF3 145 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 HEPN1Q6WQI6 88 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 HIST3H2BBQ8N257 126 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 OR9Q1Q8NGQ5 310 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 STAG3L4Q8TBR4 150 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 IMP4Q96G21 291 aaKnown RBP2.31□□□□□ -2.04
CASP4-208ENST00000530309 OR7D2Q96RA2 312 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 ADAT1Q9BUB4 502 aaKnown RBP2.31□□□□□ -2.04
CASP4-208ENST00000530309 SNHG12Q9BXW3 62 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 GNB1LQ9BYB4 327 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 TTTY12Q9BZ98 90 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 EIF5A2Q9GZV4 153 aaKnown RBP2.31□□□□□ -2.04
CASP4-208ENST00000530309 CXCL16Q9H2A7 254 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 NMNAT1Q9HAN9 279 aaPredicted RBP2.31□□□□□ -2.04
CASP4-208ENST00000530309 HRASLSQ9HDD0 168 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 COMMD3Q9UBI1 195 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 ROBO1Q9Y6N7 1651 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 QSER1Q2KHR3 1735 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 ADAMTSL1Q8N6G6 1762 aa2.31□□□□□ -2.04
CASP4-208ENST00000530309 C19orf71A6NCJ1 209 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 FTCDNL1E5RQL4 147 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 GABARAPH6UMI1 98 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 M0R129 80 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 GNGT2O14610 69 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 FADS1O60427 444 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 YPEL1O60688 119 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 HLA-DQB2P05538 268 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 CD7P09564 240 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 PET100P0DJ07 73 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 GRPRP30550 384 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 SRP9P49458 86 aaKnown RBP2.3□□□□□ -2.04
CASP4-208ENST00000530309 GNG10P50151 68 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 RAB5CP51148 216 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 MRPS10P82664 201 aaKnown RBP2.3□□□□□ -2.04
CASP4-208ENST00000530309 PRDX4Q13162 271 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 COTL1Q14019 142 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 SURF2Q15527 256 aaPredicted RBP2.3□□□□□ -2.04
CASP4-208ENST00000530309 TSNQ15631 228 aaKnown RBP2.3□□□□□ -2.04
CASP4-208ENST00000530309 C9orf64Q5T6V5 341 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 SBSNQ6UWP8 590 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 GKN2Q86XP6 184 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 RNASE11Q8TAA1 199 aaKnown RBP2.3□□□□□ -2.04
CASP4-208ENST00000530309 C16orf78Q8WTQ4 265 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 MUCL1Q96DR8 90 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 YPEL2Q96QA6 119 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 TBX5Q99593 518 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 TXNDC17Q9BRA2 123 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 OR51B6Q9H340 312 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 FAM206AQ9NX38 181 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 ABRACLQ9P1F3 81 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 HHLA2Q9UM44 414 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 ABCA3Q99758 1704 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 FOCADQ5VW36 1801 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 DOCK6Q96HP0 2047 aa2.3□□□□□ -2.04
CASP4-208ENST00000530309 MYH9P35579 1960 aaKnown RBP2.29□□□□□ -2.04
CASP4-208ENST00000530309 DOCK5Q9H7D0 1870 aa2.29□□□□□ -2.04
CASP4-208ENST00000530309 SIP14410 1827 aa2.29□□□□□ -2.04
CASP4-208ENST00000530309 NUP98P52948 1817 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms