RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 RNASE6Q93091 150 aaKnown RBP15.61■□□□□ 0.09
PCF11-203ENST00000530304 C11orf42Q8N5U0 333 aa15.61■□□□□ 0.09
PCF11-203ENST00000530304 ATMQ13315 3056 aa15.6■□□□□ 0.09
PCF11-203ENST00000530304 BORCS7Q96B45 105 aa15.6■□□□□ 0.09
PCF11-203ENST00000530304 KAAG1Q9UBP8 84 aa15.6■□□□□ 0.09
PCF11-203ENST00000530304 MAP1BP46821 2468 aaKnown RBP15.6■□□□□ 0.09
PCF11-203ENST00000530304 SSBP4Q9BWG4 385 aaPredicted RBP15.6■□□□□ 0.09
PCF11-203ENST00000530304 RPH3ALQ9UNE2 315 aa15.6■□□□□ 0.09
PCF11-203ENST00000530304 ZGRF1Q86YA3 2104 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 IGHV3-21A0A0B4J1V1 117 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 A6NNC1 897 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 VWC2LB2RUY7 222 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 NBEAP1P0C6P0 100 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 CAMPP49913 170 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 TNXAQ16473 311 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 PVRIGQ6DKI7 326 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 TRGV9Q99603 122 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 TMEM133Q9H2Q1 129 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 KLF12Q9Y4X4 402 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 AKAP13Q12802 2813 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 CNTFRP26992 372 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 GPR6P46095 362 aaPredicted RBP15.59■□□□□ 0.09
PCF11-203ENST00000530304 BATFQ16520 125 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 TEX45Q8NA69 505 aa15.59■□□□□ 0.09
PCF11-203ENST00000530304 DMXL2Q8TDJ6 3036 aa15.58■□□□□ 0.09
PCF11-203ENST00000530304 VSTM5A8MXK1 200 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 TMEM116Q8NCL8 245 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 GPR82Q96P67 336 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 WNT10AQ9GZT5 417 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 JKAMPQ9P055 326 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 PKDREJQ9NTG1 2253 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 RPL27AP46776 148 aaKnown RBP15.58■□□□□ 0.08
PCF11-203ENST00000530304 DLX1P56177 255 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 C22orf15Q8WYQ4 148 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 MLST8Q9BVC4 326 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 DYNLRB1Q9NP97 96 aa15.58■□□□□ 0.08
PCF11-203ENST00000530304 HYPMO75409 117 aa15.57■□□□□ 0.08
PCF11-203ENST00000530304 KLF5Q13887 457 aaPredicted RBP15.57■□□□□ 0.08
PCF11-203ENST00000530304 CYB5R2Q6BCY4 276 aa15.57■□□□□ 0.08
PCF11-203ENST00000530304 ALKBH7Q9BT30 221 aaPredicted RBP15.57■□□□□ 0.08
PCF11-203ENST00000530304 FAM87AP0C7U9 286 aa15.57■□□□□ 0.08
PCF11-203ENST00000530304 BTF3P20290 206 aaKnown RBP15.57■□□□□ 0.08
PCF11-203ENST00000530304 LINC00322Q6ZN03 302 aaPredicted RBP15.57■□□□□ 0.08
PCF11-203ENST00000530304 SMIM12Q96EX1 92 aa15.57■□□□□ 0.08
PCF11-203ENST00000530304 PCNX1Q96RV3 2341 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 HSBP1O75506 76 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 OR2J3O76001 311 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 PRB3Q04118 309 aaPredicted RBP15.56■□□□□ 0.08
PCF11-203ENST00000530304 LEMD1Q68G75 181 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 ATP5L2Q7Z4Y8 100 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 PRSS33Q8NF86 280 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 ABHD17AQ96GS6 310 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 TMEM208Q9BTX3 173 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 CRYGBP07316 175 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 GP9P14770 177 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 TCF24Q7RTU0 167 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 CLEC7AQ9BXN2 247 aa15.56■□□□□ 0.08
PCF11-203ENST00000530304 GSX1Q9H4S2 264 aaPredicted RBP15.56■□□□□ 0.08
PCF11-203ENST00000530304 A0A1B0GXF2 115 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 SHISA9B4DS77 424 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 E7EQL1 145 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 H3BTX0 84 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 C8orf46Q8TAG6 207 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 LPAR2Q9HBW0 351 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 SIGLEC9Q9Y336 463 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 IGLC2P0DOY2 106 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 IGLC3P0DOY3 106 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 CA7P43166 264 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 OR2D3Q8NGH3 330 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 UQCR10Q9UDW1 63 aa15.55■□□□□ 0.08
PCF11-203ENST00000530304 TOMM40O96008 361 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 PRR31Q5SQ13 230 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 LCN12Q6JVE5 192 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 GFRALQ6UXV0 394 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 ATOH7Q8N100 152 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 C5orf17Q8NAS9 161 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 PRSS22Q9GZN4 317 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 Q9H3A6 140 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 RPP21Q9H633 154 aaKnown RBP15.54■□□□□ 0.08
PCF11-203ENST00000530304 IGHV2-26A0A0B4J1V2 119 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 IGHV1-69-2A0A0G2JMI3 117 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 M0R2Z0 102 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 FMC1Q96HJ9 113 aa15.54■□□□□ 0.08
PCF11-203ENST00000530304 FAM181BA6NEQ2 426 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 DLEU1O43261 78 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 LTAP01374 205 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 MMDQ15546 238 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 RNASEKQ6P5S7 137 aaKnown RBP15.53■□□□□ 0.08
PCF11-203ENST00000530304 INSIG2Q9Y5U4 225 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 IGLV1-47P01700 117 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 TCRAP04437 139 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 PLP1P60201 277 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 SSX8Q7RTT4 187 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 TNFRSF14Q92956 283 aa15.53■□□□□ 0.08
PCF11-203ENST00000530304 HBBP68871 147 aa15.52■□□□□ 0.08
PCF11-203ENST00000530304 PPP1R27Q86WC6 154 aa15.52■□□□□ 0.08
PCF11-203ENST00000530304 GTSF1Q8WW33 167 aa15.52■□□□□ 0.08
PCF11-203ENST00000530304 F11RQ9Y624 299 aaKnown RBP15.52■□□□□ 0.08
PCF11-203ENST00000530304 ZNF292O60281 2723 aa15.52■□□□□ 0.08
PCF11-203ENST00000530304 ZNF318Q5VUA4 2279 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms