RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 ARF6P62330 175 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 LCN2P80188 198 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 FABP9Q0Z7S8 132 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 PRR31Q5SQ13 230 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 C10orf55Q5SWW7 151 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 MINOS1Q5TGZ0 78 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 SPATA31B1PQ5VZV4 182 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 IL17RELQ6ZVW7 336 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 S100A7AQ86SG5 101 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 LINC01551Q86U37 167 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 OR4X1Q8NH49 305 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 PYGO2Q9BRQ0 406 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 SLC25A33Q9BSK2 321 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 MINOS1-NBL1R4GNA1 71 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 CGB1A6NKQ9 187 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 NBR2O15453 112 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 SCGB2A1O75556 95 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 TGFAP01135 160 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 IGHV2-5P01817 119 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 CRYGCP07315 174 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 NPPCP23582 126 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 NDUFA6P56556 154 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 OR5T1Q8NG75 326 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 PIMREGQ9BSJ6 248 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 TNFRSF19Q9NS68 423 aa9.37□□□□□ -0.91
USF1-208ENST00000528768 YTHDF2Q9Y5A9 579 aaKnown RBP9.37□□□□□ -0.91
USF1-208ENST00000528768 F11RQ9Y624 299 aaKnown RBP9.37□□□□□ -0.91
USF1-208ENST00000528768 NOTCH1P46531 2555 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 IGKV1OR2-108A0A075B7D4 117 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 SCO2A0A1W2PP80 73 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 HELTA6NFD8 242 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 VWC2LB2RUY7 222 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 TIMM23O14925 209 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 GGCTO75223 188 aaKnown RBP9.36□□□□□ -0.91
USF1-208ENST00000528768 FOXH1O75593 365 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 SMIM6P0DI80 62 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 S100A2P29034 98 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 GNG4P50150 75 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 PDLIM4P50479 330 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 UBE2L3P68036 154 aaKnown RBP9.36□□□□□ -0.91
USF1-208ENST00000528768 MMDQ15546 238 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 MLANAQ16655 118 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 TIGITQ495A1 244 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 TMEM116Q8NCL8 245 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 NPBQ8NG41 125 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 OR51G1Q8NGK1 321 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 SRSF12Q8WXF0 261 aaKnown RBP9.36□□□□□ -0.91
USF1-208ENST00000528768 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 PAXXQ9BUH6 204 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 FBXL15Q9H469 300 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 TPSG1Q9NRR2 321 aa9.36□□□□□ -0.91
USF1-208ENST00000528768 TMEM89A2RUT3 159 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 ZNF98A6NK75 572 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 ODF3BA8MYP8 253 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 E7EUB6 86 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 HYPMO75409 117 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 TRGC2P03986 189 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 TYMSP04818 313 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 REG1AP05451 166 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 HOXA5P20719 270 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 GATA2P23769 480 aaPredicted RBP9.35□□□□□ -0.91
USF1-208ENST00000528768 MEOX2P50222 304 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 TAS2R60P59551 318 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 FOXL1Q12952 345 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 HCP5Q6MZN7 132 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 NECAP1Q8NC96 275 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 OR5AU1Q8NGC0 362 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 RITA1Q96K30 269 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 OR51M1Q9H341 326 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 FNDC4Q9H6D8 234 aaPredicted RBP9.35□□□□□ -0.91
USF1-208ENST00000528768 C1RLQ9NZP8 487 aa9.35□□□□□ -0.91
USF1-208ENST00000528768 TBL2Q9Y4P3 447 aaKnown RBP9.35□□□□□ -0.91
USF1-208ENST00000528768 A0A1W2PPQ1 181 aa9.34□□□□□ -0.91
USF1-208ENST00000528768 LY6HO94772 140 aa9.34□□□□□ -0.91
USF1-208ENST00000528768 CDX1P47902 265 aaPredicted RBP9.34□□□□□ -0.91
USF1-208ENST00000528768 CNN1P51911 297 aaKnown RBP9.34□□□□□ -0.91
USF1-208ENST00000528768 HES1Q14469 280 aa9.34□□□□□ -0.91
USF1-208ENST00000528768 MRGPRG-AS1Q2M3A8 158 aa9.34□□□□□ -0.91
USF1-208ENST00000528768 TMEM37Q8WXS4 190 aa9.34□□□□□ -0.91
USF1-208ENST00000528768 C12orf57Q99622 126 aa9.34□□□□□ -0.91
USF1-208ENST00000528768 ZNF355PQ9NSJ1 428 aa9.34□□□□□ -0.91
USF1-208ENST00000528768 RNF24Q9Y225 148 aa9.34□□□□□ -0.91
USF1-208ENST00000528768 HILPDAQ9Y5L2 63 aa9.34□□□□□ -0.91
USF1-208ENST00000528768 TRAV30A0A087WSZ9 112 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 PSMB11A5LHX3 300 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 TEX22C9J3V5 150 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 NDUFA3O95167 84 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 TRGC1P0CF51 173 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 CNTFRP26992 372 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 CRYBB3P26998 211 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 S100A7P31151 101 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 BRS3P32247 399 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 PLP1P60201 277 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 SUMO1P63165 101 aaKnown RBP9.33□□□□□ -0.92
USF1-208ENST00000528768 DEFA6Q01524 100 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 COX19Q49B96 90 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 VMO1Q7Z5L0 202 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 OCC1Q8TAD7 63 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms