RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 CCR6P51684 374 aa18.65■□□□□ 0.58
TRIM3-206ENST00000528227 CENPSQ8N2Z9 138 aa18.65■□□□□ 0.58
TRIM3-206ENST00000528227 DTD1Q8TEA8 209 aa18.65■□□□□ 0.58
TRIM3-206ENST00000528227 C1QTNF4Q9BXJ3 329 aa18.65■□□□□ 0.58
TRIM3-206ENST00000528227 CCDC59Q9P031 241 aaKnown RBP18.65■□□□□ 0.58
TRIM3-206ENST00000528227 SCP2D1Q9UJQ7 156 aa18.65■□□□□ 0.58
TRIM3-206ENST00000528227 CELA1Q9UNI1 258 aa18.65■□□□□ 0.58
TRIM3-206ENST00000528227 IGHV4-4A0A075B6R2 117 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 A0A0B4J2A0 478 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 H3BMM0 161 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 NUTF2P61970 127 aaKnown RBP18.64■□□□□ 0.57
TRIM3-206ENST00000528227 SMCO1Q147U7 214 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 LGI3Q8N145 548 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 OR51G1Q8NGK1 321 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 DYNC2LI1Q8TCX1 351 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 SCGB3A2Q96PL1 93 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 RBKSQ9H477 322 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 SHPKQ9UHJ6 478 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 DNAH6Q9C0G6 4158 aa18.64■□□□□ 0.57
TRIM3-206ENST00000528227 SUPT4H1P63272 117 aaKnown RBP18.63■□□□□ 0.57
TRIM3-206ENST00000528227 LYZL2Q7Z4W2 148 aa18.63■□□□□ 0.57
TRIM3-206ENST00000528227 RNF125Q96EQ8 232 aa18.63■□□□□ 0.57
TRIM3-206ENST00000528227 XCL2Q9UBD3 114 aa18.63■□□□□ 0.57
TRIM3-206ENST00000528227 KLF9Q13886 244 aaPredicted RBP18.62■□□□□ 0.57
TRIM3-206ENST00000528227 RAB2BQ8WUD1 216 aa18.62■□□□□ 0.57
TRIM3-206ENST00000528227 HECTD4Q9Y4D8 3996 aa18.61■□□□□ 0.57
TRIM3-206ENST00000528227 HLA-DRB4P13762 266 aa18.61■□□□□ 0.57
TRIM3-206ENST00000528227 AKR1C4P17516 323 aa18.61■□□□□ 0.57
TRIM3-206ENST00000528227 NUP62P37198 522 aaPredicted RBP18.61■□□□□ 0.57
TRIM3-206ENST00000528227 C12orf74Q32Q52 190 aa18.61■□□□□ 0.57
TRIM3-206ENST00000528227 RNF126Q9BV68 326 aa18.61■□□□□ 0.57
TRIM3-206ENST00000528227 MCUBQ9NWR8 336 aa18.61■□□□□ 0.57
TRIM3-206ENST00000528227 RSL24D1Q9UHA3 163 aaKnown RBP18.61■□□□□ 0.57
TRIM3-206ENST00000528227 HLA-DRB4X5D2U9 266 aa18.61■□□□□ 0.57
TRIM3-206ENST00000528227 NKX2-1P43699 371 aaPredicted RBP18.6■□□□□ 0.57
TRIM3-206ENST00000528227 OR8G2PQ6IF36 304 aa18.6■□□□□ 0.57
TRIM3-206ENST00000528227 ZNF767PQ75MW2 155 aa18.6■□□□□ 0.57
TRIM3-206ENST00000528227 PBDC1Q9BVG4 233 aa18.6■□□□□ 0.57
TRIM3-206ENST00000528227 IGKV1D-37A0A075B6S9 117 aa18.59■□□□□ 0.57
TRIM3-206ENST00000528227 ATP5IP56385 69 aaPredicted RBP18.59■□□□□ 0.57
TRIM3-206ENST00000528227 ZNF90Q03938 601 aa18.59■□□□□ 0.57
TRIM3-206ENST00000528227 GAMTQ14353 236 aa18.59■□□□□ 0.57
TRIM3-206ENST00000528227 BCL7BQ9BQE9 202 aa18.59■□□□□ 0.57
TRIM3-206ENST00000528227 KRTAP17-1Q9BYP8 105 aa18.59■□□□□ 0.57
TRIM3-206ENST00000528227 DEFB131BA0A096LNP1 70 aa18.58■□□□□ 0.56
TRIM3-206ENST00000528227 ZFP92A6NM28 416 aa18.58■□□□□ 0.56
TRIM3-206ENST00000528227 AMBPP02760 352 aa18.58■□□□□ 0.56
TRIM3-206ENST00000528227 ANXA3P12429 323 aa18.58■□□□□ 0.56
TRIM3-206ENST00000528227 GPX4P36969 197 aaPredicted RBP18.58■□□□□ 0.56
TRIM3-206ENST00000528227 TMBIM6P55061 237 aa18.58■□□□□ 0.56
TRIM3-206ENST00000528227 SRPXP78539 464 aa18.58■□□□□ 0.56
TRIM3-206ENST00000528227 GDF5OSQ5U4N7 250 aa18.58■□□□□ 0.56
TRIM3-206ENST00000528227 SOSTQ9BQB4 213 aa18.58■□□□□ 0.56
TRIM3-206ENST00000528227 PFDN2Q9UHV9 154 aa18.58■□□□□ 0.56
TRIM3-206ENST00000528227 ZNF705AQ6ZN79 300 aaPredicted RBP18.57■□□□□ 0.56
TRIM3-206ENST00000528227 OR1S1Q8NH92 325 aa18.57■□□□□ 0.56
TRIM3-206ENST00000528227 SLC35E1Q96K37 410 aa18.57■□□□□ 0.56
TRIM3-206ENST00000528227 WDR12Q9GZL7 423 aaKnown RBP18.57■□□□□ 0.56
TRIM3-206ENST00000528227 SLIRPQ9GZT3 109 aaKnown RBP18.57■□□□□ 0.56
TRIM3-206ENST00000528227 DEFB1P60022 68 aa18.56■□□□□ 0.56
TRIM3-206ENST00000528227 NEU1Q99519 415 aa18.56■□□□□ 0.56
TRIM3-206ENST00000528227 HERC2O95714 4834 aa18.56■□□□□ 0.56
TRIM3-206ENST00000528227 FABP12A6NFH5 140 aa18.55■□□□□ 0.56
TRIM3-206ENST00000528227 TNFSF8P32971 234 aa18.55■□□□□ 0.56
TRIM3-206ENST00000528227 SAV1Q9H4B6 383 aaPredicted RBP18.55■□□□□ 0.56
TRIM3-206ENST00000528227 ZNF705FA8MVS1 300 aaPredicted RBP18.54■□□□□ 0.56
TRIM3-206ENST00000528227 SOCS3O14543 225 aa18.54■□□□□ 0.56
TRIM3-206ENST00000528227 PITX3O75364 302 aa18.54■□□□□ 0.56
TRIM3-206ENST00000528227 ZNF705DP0CH99 300 aaPredicted RBP18.54■□□□□ 0.56
TRIM3-206ENST00000528227 ZNF705BP0CI00 300 aaPredicted RBP18.54■□□□□ 0.56
TRIM3-206ENST00000528227 ID1P41134 155 aa18.54■□□□□ 0.56
TRIM3-206ENST00000528227 PSMB3P49720 205 aa18.54■□□□□ 0.56
TRIM3-206ENST00000528227 C1orf194Q5T5A4 169 aa18.54■□□□□ 0.56
TRIM3-206ENST00000528227 FOXI2Q6ZQN5 318 aa18.54■□□□□ 0.56
TRIM3-206ENST00000528227 LINC00052Q96N35 136 aa18.54■□□□□ 0.56
TRIM3-206ENST00000528227 SCRT1Q9BWW7 348 aa18.54■□□□□ 0.56
TRIM3-206ENST00000528227 PIGBOS1A0A0B4J2F0 54 aa18.53■□□□□ 0.56
TRIM3-206ENST00000528227 DUXBA0A1W2PPF3 345 aa18.53■□□□□ 0.56
TRIM3-206ENST00000528227 IGKV3-20P01619 116 aa18.53■□□□□ 0.56
TRIM3-206ENST00000528227 FABP1P07148 127 aa18.53■□□□□ 0.56
TRIM3-206ENST00000528227 LYZP61626 148 aa18.53■□□□□ 0.56
TRIM3-206ENST00000528227 SNRPGP15A8MWD9 76 aa18.52■□□□□ 0.56
TRIM3-206ENST00000528227 FXYD7P58549 80 aa18.52■□□□□ 0.56
TRIM3-206ENST00000528227 ZNF709Q8N972 641 aa18.52■□□□□ 0.56
TRIM3-206ENST00000528227 CLUHP3Q96NS8 147 aa18.52■□□□□ 0.56
TRIM3-206ENST00000528227 TRGV9Q99603 122 aa18.52■□□□□ 0.56
TRIM3-206ENST00000528227 SMIM9A6NGZ8 99 aa18.51■□□□□ 0.55
TRIM3-206ENST00000528227 RAB11AP62491 216 aa18.51■□□□□ 0.55
TRIM3-206ENST00000528227 OR2F1Q13607 317 aa18.51■□□□□ 0.55
TRIM3-206ENST00000528227 TMED4Q7Z7H5 227 aa18.51■□□□□ 0.55
TRIM3-206ENST00000528227 COQ8AQ8NI60 647 aa18.51■□□□□ 0.55
TRIM3-206ENST00000528227 NDUFAF3Q9BU61 184 aa18.51■□□□□ 0.55
TRIM3-206ENST00000528227 IGKV1OR2-108A0A075B7D4 117 aa18.5■□□□□ 0.55
TRIM3-206ENST00000528227 TMEM189A5PLL7 270 aa18.5■□□□□ 0.55
TRIM3-206ENST00000528227 H3BMQ9 156 aa18.5■□□□□ 0.55
TRIM3-206ENST00000528227 SPART-AS1P0CW21 52 aa18.5■□□□□ 0.55
TRIM3-206ENST00000528227 IAPPP10997 89 aa18.5■□□□□ 0.55
TRIM3-206ENST00000528227 FAUP35544 74 aaKnown RBP18.5■□□□□ 0.55
TRIM3-206ENST00000528227 TMEM128Q5BJH2 165 aa18.5■□□□□ 0.55
TRIM3-206ENST00000528227 GSG1LQ6UXU4 331 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms