RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 DYNC2H1Q8NCM8 4307 aaKnown RBP24.32■■□□□ 1.48
SSSCA1-205ENST00000527920 MPTX1A8MV57 137 aa24.32■■□□□ 1.48
SSSCA1-205ENST00000527920 NUP62P37198 522 aaPredicted RBP24.32■■□□□ 1.48
SSSCA1-205ENST00000527920 IGKV1D-37A0A075B6S9 117 aa24.31■■□□□ 1.48
SSSCA1-205ENST00000527920 ZFP92A6NM28 416 aa24.31■■□□□ 1.48
SSSCA1-205ENST00000527920 FABP1P07148 127 aa24.31■■□□□ 1.48
SSSCA1-205ENST00000527920 RNF125Q96EQ8 232 aa24.31■■□□□ 1.48
SSSCA1-205ENST00000527920 MAGT1Q9H0U3 335 aa24.31■■□□□ 1.48
SSSCA1-205ENST00000527920 TENM2Q9NT68 2774 aa24.31■■□□□ 1.48
SSSCA1-205ENST00000527920 BUB3O43684 328 aa24.3■■□□□ 1.48
SSSCA1-205ENST00000527920 ADAP1O75689 374 aa24.3■■□□□ 1.48
SSSCA1-205ENST00000527920 ID3Q02535 119 aa24.3■■□□□ 1.48
SSSCA1-205ENST00000527920 OR8G2PQ6IF36 304 aa24.3■■□□□ 1.48
SSSCA1-205ENST00000527920 PFDN2Q9UHV9 154 aa24.3■■□□□ 1.48
SSSCA1-205ENST00000527920 IFNA21P01568 189 aa24.29■■□□□ 1.48
SSSCA1-205ENST00000527920 ATF4P18848 351 aaPredicted RBP24.29■■□□□ 1.48
SSSCA1-205ENST00000527920 C4orf46Q504U0 113 aa24.29■■□□□ 1.48
SSSCA1-205ENST00000527920 LINC00299Q6ZSB3 139 aa24.29■■□□□ 1.48
SSSCA1-205ENST00000527920 GATAD1Q8WUU5 269 aa24.29■■□□□ 1.48
SSSCA1-205ENST00000527920 TRGV9Q99603 122 aa24.29■■□□□ 1.48
SSSCA1-205ENST00000527920 LCE6AA0A183 80 aa24.28■■□□□ 1.48
SSSCA1-205ENST00000527920 PRSS46E5RG02 174 aa24.28■■□□□ 1.48
SSSCA1-205ENST00000527920 WRBO00258 174 aa24.28■■□□□ 1.48
SSSCA1-205ENST00000527920 ANXA7P20073 488 aaKnown RBP24.28■■□□□ 1.48
SSSCA1-205ENST00000527920 LEMD1Q68G75 181 aa24.28■■□□□ 1.48
SSSCA1-205ENST00000527920 THAP8Q8NA92 274 aa24.27■■□□□ 1.48
SSSCA1-205ENST00000527920 SEPSECSQ9HD40 501 aaKnown RBP24.27■■□□□ 1.48
SSSCA1-205ENST00000527920 PAIP2BQ9ULR5 123 aaKnown RBP24.27■■□□□ 1.48
SSSCA1-205ENST00000527920 PLA2G10O15496 165 aa24.26■■□□□ 1.47
SSSCA1-205ENST00000527920 ZNF90Q03938 601 aa24.26■■□□□ 1.47
SSSCA1-205ENST00000527920 OR4D5Q8NGN0 318 aa24.26■■□□□ 1.47
SSSCA1-205ENST00000527920 A0A0J9YWU9 116 aa24.25■■□□□ 1.47
SSSCA1-205ENST00000527920 LYRM1O43325 122 aa24.25■■□□□ 1.47
SSSCA1-205ENST00000527920 STHQ8IWL8 128 aa24.25■■□□□ 1.47
SSSCA1-205ENST00000527920 CCDC32Q9BV29 185 aa24.25■■□□□ 1.47
SSSCA1-205ENST00000527920 NRN1Q9NPD7 142 aa24.25■■□□□ 1.47
SSSCA1-205ENST00000527920 STRAPQ9Y3F4 350 aaKnown RBP24.25■■□□□ 1.47
SSSCA1-205ENST00000527920 ZNF688P0C7X2 276 aa24.24■■□□□ 1.47
SSSCA1-205ENST00000527920 SPANXN5Q5MJ07 72 aa24.24■■□□□ 1.47
SSSCA1-205ENST00000527920 MITD1Q8WV92 249 aa24.24■■□□□ 1.47
SSSCA1-205ENST00000527920 IGKV1OR2-108A0A075B7D4 117 aa24.23■■□□□ 1.47
SSSCA1-205ENST00000527920 SNRPGP15A8MWD9 76 aa24.23■■□□□ 1.47
SSSCA1-205ENST00000527920 NKX2-1P43699 371 aaPredicted RBP24.23■■□□□ 1.47
SSSCA1-205ENST00000527920 SIGLEC15Q6ZMC9 328 aa24.23■■□□□ 1.47
SSSCA1-205ENST00000527920 PBDC1Q9BVG4 233 aa24.23■■□□□ 1.47
SSSCA1-205ENST00000527920 C20orf85Q9H1P6 137 aa24.23■■□□□ 1.47
SSSCA1-205ENST00000527920 CFDP00746 253 aaPredicted RBP24.22■■□□□ 1.47
SSSCA1-205ENST00000527920 CA1P00915 261 aaPredicted RBP24.22■■□□□ 1.47
SSSCA1-205ENST00000527920 C1orf194Q5T5A4 169 aa24.22■■□□□ 1.47
SSSCA1-205ENST00000527920 TRPT1Q86TN4 253 aaKnown RBP24.22■■□□□ 1.47
SSSCA1-205ENST00000527920 TMEM217Q8N7C4 229 aa24.22■■□□□ 1.47
SSSCA1-205ENST00000527920 POLR2GP62487 172 aaKnown RBP eCLIP24.21■■□□□ 1.47
SSSCA1-205ENST00000527920 SACSQ9NZJ4 4579 aa24.2■■□□□ 1.47
SSSCA1-205ENST00000527920 SNRPD3P62318 126 aaKnown RBP24.2■■□□□ 1.46
SSSCA1-205ENST00000527920 TMEM41BQ5BJD5 291 aa24.2■■□□□ 1.46
SSSCA1-205ENST00000527920 H3BP45 60 aa24.19■■□□□ 1.46
SSSCA1-205ENST00000527920 SPP1P10451 314 aa24.19■■□□□ 1.46
SSSCA1-205ENST00000527920 LYZP61626 148 aa24.19■■□□□ 1.46
SSSCA1-205ENST00000527920 MORN3Q6PF18 240 aaPredicted RBP24.19■■□□□ 1.46
SSSCA1-205ENST00000527920 SMIM8Q96KF7 97 aa24.19■■□□□ 1.46
SSSCA1-205ENST00000527920 FBXL17Q9UF56 701 aa24.19■■□□□ 1.46
SSSCA1-205ENST00000527920 TCRBP04435 133 aa24.18■■□□□ 1.46
SSSCA1-205ENST00000527920 IAH1Q2TAA2 248 aaPredicted RBP24.18■■□□□ 1.46
SSSCA1-205ENST00000527920 RARRES2Q99969 163 aa24.18■■□□□ 1.46
SSSCA1-205ENST00000527920 PSENENQ9NZ42 101 aa24.18■■□□□ 1.46
SSSCA1-205ENST00000527920 SLC45A2Q9UMX9 530 aa24.18■■□□□ 1.46
SSSCA1-205ENST00000527920 RYR2Q92736 4967 aa24.18■■□□□ 1.46
SSSCA1-205ENST00000527920 OR2F1Q13607 317 aa24.17■■□□□ 1.46
SSSCA1-205ENST00000527920 PSMG4Q5JS54 123 aa24.17■■□□□ 1.46
SSSCA1-205ENST00000527920 ACOT7LQ6ZUV0 252 aa24.17■■□□□ 1.46
SSSCA1-205ENST00000527920 SSSCA1O60232 199 aa24.16■■□□□ 1.46
SSSCA1-205ENST00000527920 EWSR1Q01844 656 aaKnown RBP eCLIP24.16■■□□□ 1.46
SSSCA1-205ENST00000527920 RAB40CQ96S21 281 aa24.16■■□□□ 1.46
SSSCA1-205ENST00000527920 KNCNA6PVL3 124 aa24.15■■□□□ 1.46
SSSCA1-205ENST00000527920 TAS2R30P59541 319 aa24.15■■□□□ 1.46
SSSCA1-205ENST00000527920 ACTL10Q5JWF8 245 aa24.15■■□□□ 1.46
SSSCA1-205ENST00000527920 TMEM144Q7Z5S9 345 aa24.15■■□□□ 1.46
SSSCA1-205ENST00000527920 ZBTB8BQ8NAP8 495 aaPredicted RBP24.15■■□□□ 1.46
SSSCA1-205ENST00000527920 OR11H2Q8NH07 326 aa24.15■■□□□ 1.46
SSSCA1-205ENST00000527920 S100ZQ8WXG8 99 aa24.15■■□□□ 1.46
SSSCA1-205ENST00000527920 C11orf68Q9H3H3 251 aaKnown RBP24.15■■□□□ 1.46
SSSCA1-205ENST00000527920 JTBO76095 146 aa24.14■■□□□ 1.45
SSSCA1-205ENST00000527920 GIG44P09565 113 aaPredicted RBP24.14■■□□□ 1.45
SSSCA1-205ENST00000527920 AKR1C1Q04828 323 aa24.14■■□□□ 1.45
SSSCA1-205ENST00000527920 LYSTQ99698 3801 aa24.13■■□□□ 1.45
SSSCA1-205ENST00000527920 PAX9P55771 341 aa24.13■■□□□ 1.45
SSSCA1-205ENST00000527920 BPIFCQ8NFQ6 507 aa24.13■■□□□ 1.45
SSSCA1-205ENST00000527920 NUDT15Q9NV35 164 aa24.13■■□□□ 1.45
SSSCA1-205ENST00000527920 PMS2P5A8MQ11 134 aa24.12■■□□□ 1.45
SSSCA1-205ENST00000527920 TMEM14EPQ6UXP3 125 aa24.12■■□□□ 1.45
SSSCA1-205ENST00000527920 PPP1R14BQ96C90 147 aa24.12■■□□□ 1.45
SSSCA1-205ENST00000527920 CXorf65A6NEN9 183 aa24.11■■□□□ 1.45
SSSCA1-205ENST00000527920 NUPR2A6NF83 97 aa24.11■■□□□ 1.45
SSSCA1-205ENST00000527920 FNDC10F2Z333 226 aa24.11■■□□□ 1.45
SSSCA1-205ENST00000527920 TSC22D2O75157 780 aa24.11■■□□□ 1.45
SSSCA1-205ENST00000527920 ZNF431Q8TF32 576 aaPredicted RBP24.11■■□□□ 1.45
SSSCA1-205ENST00000527920 S100A7P31151 101 aa24.1■■□□□ 1.45
SSSCA1-205ENST00000527920 DLK1P80370 383 aa24.1■■□□□ 1.45
SSSCA1-205ENST00000527920 SAMD13Q5VXD3 122 aa24.1■■□□□ 1.45
SSSCA1-205ENST00000527920 GSKIPQ9P0R6 139 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms