RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 OR4P4Q8NGL7 312 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 LSM10Q969L4 123 aaKnown RBP3.24□□□□□ -1.89
CHD7-205ENST00000527825 CIB3Q96Q77 187 aaPredicted RBP3.24□□□□□ -1.89
CHD7-205ENST00000527825 PRR25Q96S07 402 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 TXNDC17Q9BRA2 123 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 RSG1Q9BU20 258 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 FAM234AQ9H0X4 552 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 CSTL1Q9H114 145 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 VSIRQ9H7M9 311 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 CENPMQ9NSP4 180 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 PLEKHJ1Q9NW61 149 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 ZNF586Q9NXT0 402 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 PPP1R3CQ9UQK1 317 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 LSM4Q9Y4Z0 139 aaKnown RBP3.24□□□□□ -1.89
CHD7-205ENST00000527825 TRAPPC1Q9Y5R8 145 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 SMAD5-AS1Q9Y6J3 95 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 LY96Q9Y6Y9 160 aa3.24□□□□□ -1.89
CHD7-205ENST00000527825 A0A0G2JRQ6 117 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 TCRBV4S1A1TA0A5B7 111 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 OR5B21A6NL26 309 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 ZNF850A8MQ14 1090 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 C9JCJ5 164 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 C17orf112F2Z3M2 114 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 K7ERU9 68 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 SIRPB1O00241 398 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 F2RL2O00254 374 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 DEGS1O15121 323 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 CHST1O43916 411 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 PDE6DO43924 150 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 ZNF253O75346 499 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 VAMP5O95183 116 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 NAPSAO96009 420 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 NRASP01111 189 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 KRASP01116 189 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 IGHV3-13P01766 116 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 HLA-DRB1P01911 266 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 MT-ND6P03923 174 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 OR10J4P0C629 311 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 SCGB1A1P11684 91 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 NPPCP23582 126 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 TSPOP30536 169 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 MC5RP33032 325 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 HNRNPA3P51991 378 aaKnown RBP3.23□□□□□ -1.89
CHD7-205ENST00000527825 CLDN17P56750 224 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 RBM11P57052 281 aaKnown RBP3.23□□□□□ -1.89
CHD7-205ENST00000527825 FXYD4P59646 89 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 HBG1P69891 147 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 HBG2P69892 147 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 ARL16Q0P5N6 197 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 TDRG1Q3Y452 100 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 COX19Q49B96 90 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 SPATA45Q537H7 98 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 SPIN3Q5JUX0 258 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 C10orf128Q5T292 105 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 FAM78BQ5VT40 261 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 ACSM6Q6P461 480 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 TMEM14EPQ6UXP3 125 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 C19orf35Q6ZS72 473 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 COMMD2Q86X83 199 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 CALHM1Q8IU99 346 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 SBSPONQ8IVN8 264 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 ZNF695Q8IW36 515 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 RPP25LQ8N5L8 163 aaKnown RBP3.23□□□□□ -1.89
CHD7-205ENST00000527825 TMEM217Q8N7C4 229 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 NECAP1Q8NC96 275 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 OR1L6Q8NGR2 347 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 PPP1R35Q8TAP8 253 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 C11orf52Q96A22 123 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 RPUSD4Q96CM3 377 aaKnown RBP3.23□□□□□ -1.89
CHD7-205ENST00000527825 KCNS1Q96KK3 526 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 UHRF2Q96PU4 802 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 ATP6V0BQ99437 205 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 HSPB9Q9BQS6 159 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 ZNF430Q9H8G1 570 aaPredicted RBP3.23□□□□□ -1.89
CHD7-205ENST00000527825 KCNIP2Q9NS61 270 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 ZNF391Q9UJN7 358 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 PAM16Q9Y3D7 125 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 TSSC4Q9Y5U2 329 aaPredicted RBP3.23□□□□□ -1.89
CHD7-205ENST00000527825 KIAA1109Q2LD37 5005 aa3.23□□□□□ -1.89
CHD7-205ENST00000527825 IGKV1-27A0A075B6S5 117 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 IGKV1D-13A0A0B4J2D9 117 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 IGKV1-12A0A0C4DH73 117 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 A0A1W2PRD5 423 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 A0A1W2PRF3 423 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 A0A1W2PRM7 423 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 ZNF320A2RRD8 509 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 PMS2P5A8MQ11 134 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 DIRC3C9JPN6 131 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 SLC33A1O00400 549 aaPredicted RBP3.22□□□□□ -1.89
CHD7-205ENST00000527825 SYNGR2O43760 224 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 TIMM8AO60220 97 aaPredicted RBP3.22□□□□□ -1.89
CHD7-205ENST00000527825 S1PR2O95136 353 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 LHBP01229 141 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 IGKV1D-12P01611 117 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 CLEC3BP05452 202 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 GPX1P07203 203 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 CRYGCP07315 174 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 P0C879 139 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 STAG3L2P0CL84 134 aa3.22□□□□□ -1.89
CHD7-205ENST00000527825 IGKV1-13P0DP09 117 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms