RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 AKR1C2P52895 323 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 BLCAPP62952 87 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 ZNF415Q09FC8 603 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 POU2AF1Q16633 256 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 C5orf64Q2M2E5 130 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 C6orf226Q5I0X4 101 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 OR4A47Q6IF82 309 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 ZNF562Q6V9R5 426 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 MMD2Q8IY49 270 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 PUSL1Q8N0Z8 303 aaKnown RBP3.46□□□□□ -1.86
USP48-211ENST00000526044 SLC35G3Q8N808 338 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 C5orf56Q8N8D9 126 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 Q8N9W7 124 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 TMEM167AQ8TBQ9 72 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 GPR146Q96CH1 333 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 SEC22AQ96IW7 307 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 CLCC1Q96S66 551 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 CHIAQ9BZP6 476 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 MED28Q9H204 178 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.46□□□□□ -1.86
USP48-211ENST00000526044 BET1LQ9NYM9 111 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 CACFD1Q9UGQ2 172 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 VPREB3Q9UKI3 123 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 NSG2Q9Y328 171 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 SIGLEC9Q9Y336 463 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 MOB4Q9Y3A3 225 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 ALG5Q9Y673 324 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 CSMD1Q96PZ7 3565 aa3.46□□□□□ -1.86
USP48-211ENST00000526044 MAP1AP78559 2803 aaPredicted RBP3.46□□□□□ -1.86
USP48-211ENST00000526044 MYO9AB2RTY4 2548 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 TRAV3A0A0B4J244 114 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 TEX50A0A1B0GTY4 177 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 FBLL1A6NHQ2 334 aaKnown RBP3.45□□□□□ -1.86
USP48-211ENST00000526044 MSGN1A6NI15 193 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 GOSR2O14653 212 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 CHST1O43916 411 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 ADAP1O75689 374 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 IFNA17P01571 189 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 OR9G9P0C7N8 305 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 SULT1A3P0DMM9 295 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 SULT1A4P0DMN0 295 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 SLC25A6P12236 298 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 HLA-GP17693 338 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 MAS1LP35410 378 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 HSPE1P61604 102 aaKnown RBP3.45□□□□□ -1.86
USP48-211ENST00000526044 RPL8P62917 257 aaKnown RBP3.45□□□□□ -1.86
USP48-211ENST00000526044 UBA52P62987 128 aaKnown RBP3.45□□□□□ -1.86
USP48-211ENST00000526044 TMEM267Q0VDI3 215 aaPredicted RBP3.45□□□□□ -1.86
USP48-211ENST00000526044 SMCO1Q147U7 214 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 FXYD3Q14802 87 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 TNXAQ16473 311 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 PRSS8Q16651 343 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 IAH1Q2TAA2 248 aaPredicted RBP3.45□□□□□ -1.86
USP48-211ENST00000526044 THOC7Q6I9Y2 204 aaKnown RBP3.45□□□□□ -1.86
USP48-211ENST00000526044 C19orf35Q6ZS72 473 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 FAM71E2Q8N5Q1 922 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 OR1L8Q8NGR8 309 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 OR1S1Q8NH92 325 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 OR2T6Q8NHC8 308 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 OR10C1Q96KK4 312 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 C2orf50Q96LR7 162 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 SPIN2AQ99865 258 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 SPIN2BQ9BPZ2 258 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 PDCD10Q9BUL8 212 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 COMMD5Q9GZQ3 224 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 FBXL15Q9H469 300 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 ZNF430Q9H8G1 570 aaPredicted RBP3.45□□□□□ -1.86
USP48-211ENST00000526044 ESM1Q9NQ30 184 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 GSKIPQ9P0R6 139 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 PRNDQ9UKY0 176 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 OR51B2Q9Y5P1 312 aa3.45□□□□□ -1.86
USP48-211ENST00000526044 TET2Q6N021 2002 aaPredicted RBP3.44□□□□□ -1.86
USP48-211ENST00000526044 CCDC168Q8NDH2 2452 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 A0A0G2JRQ6 117 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 RAB19A4D1S5 217 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 MPTX1A8MV57 137 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 CCSO14618 274 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 CHEK1O14757 476 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 PITX3O75364 302 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 MED6O75586 246 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 SIX6O95475 246 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 CA2P00918 260 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 IGHG2P01859 326 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 HLA-DRB1P01911 266 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 P0C879 139 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 TRAPPC2P0DI81 140 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 TRAPPC2BP0DI82 140 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 RPL27AP46776 148 aaKnown RBP3.44□□□□□ -1.86
USP48-211ENST00000526044 OR2B8PP59922 312 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 UBE2G2P60604 165 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 SPCS3P61009 180 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 RRAS2P62070 204 aaPredicted RBP3.44□□□□□ -1.86
USP48-211ENST00000526044 ERHP84090 104 aaKnown RBP3.44□□□□□ -1.86
USP48-211ENST00000526044 CYCSP99999 105 aaKnown RBP3.44□□□□□ -1.86
USP48-211ENST00000526044 USF2Q15853 346 aaPredicted RBP3.44□□□□□ -1.86
USP48-211ENST00000526044 NMSQ5H8A3 153 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 SLC35E3Q7Z769 313 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 ZNF429Q86V71 674 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 OR4C5Q8NGB2 326 aa3.44□□□□□ -1.86
USP48-211ENST00000526044 OR1L6Q8NGR2 347 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms