RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 MFFQ9GZY8 342 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 CLEC5AQ9NY25 188 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 HSPB7Q9UBY9 170 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 CACNG5Q9UF02 275 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 F11RQ9Y624 299 aaKnown RBP4.8□□□□□ -1.64
CD44-221ENST00000526000 U3KQ87 197 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 HERC2O95714 4834 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 IGHV4-28A0A0C4DH34 117 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 A0A0G2JRQ6 117 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 CORTO00230 105 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 WRBO00258 174 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 ST8SIA3O43173 380 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 PET100P0DJ07 73 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 ATF4P18848 351 aaPredicted RBP4.79□□□□□ -1.64
CD44-221ENST00000526000 HTR2BP41595 481 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 NKX2-1P43699 371 aaPredicted RBP4.79□□□□□ -1.64
CD44-221ENST00000526000 MFAP4P55083 255 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 TAS2R30P59541 319 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 ID3Q02535 119 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 IZUMO4Q1ZYL8 232 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 IAH1Q2TAA2 248 aaPredicted RBP4.79□□□□□ -1.64
CD44-221ENST00000526000 SPSB3Q6PJ21 355 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 Q6ZRM9 215 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
CD44-221ENST00000526000 OR4D5Q8NGN0 318 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 OR1P1Q8NH06 330 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 ST8SIA2Q92186 375 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 ZNF414Q96IQ9 312 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 C2orf50Q96LR7 162 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 RAB40CQ96S21 281 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 SCRT1Q9BWW7 348 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 MED28Q9H204 178 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 RABAC1Q9UI14 185 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 ALG5Q9Y673 324 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 KMT2AQ03164 3969 aa4.79□□□□□ -1.64
CD44-221ENST00000526000 C5orf51A6NDU8 294 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 C15orf62A8K5M9 175 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 CEBPZOSA8MTT3 80 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 SYNGR2O43760 224 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 GNG7O60262 68 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 ADAP1O75689 374 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 MT-CO2P00403 227 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 RLN2P04090 185 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 PVALBP20472 110 aaPredicted RBP4.78□□□□□ -1.64
CD44-221ENST00000526000 SNCAP37840 140 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 HOXA1P49639 335 aaPredicted RBP4.78□□□□□ -1.64
CD44-221ENST00000526000 CMC4P56277 68 aaPredicted RBP4.78□□□□□ -1.64
CD44-221ENST00000526000 PAFAH1B2P68402 229 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 MLANAQ16655 118 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 C2orf83Q53S99 150 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 FAM90A2PQ658T7 463 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 PVRIGQ6DKI7 326 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 TOMM20LQ6UXN7 152 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 Q6ZNX1 250 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 Q6ZTC4 211 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 STHQ8IWL8 128 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 DTD1Q8TEA8 209 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 KRTAP4-5Q9BYR2 181 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 MS4A6AQ9H2W1 248 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 HEYLQ9NQ87 328 aaPredicted RBP4.78□□□□□ -1.64
CD44-221ENST00000526000 PRR13Q9NZ81 148 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 PLA2G2EQ9NZK7 142 aa4.78□□□□□ -1.64
CD44-221ENST00000526000 IGLV2-18A0A075B6J9 118 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 IGHV4-4A0A075B6R2 117 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 ELOA3CA0A087WX78 387 aaPredicted RBP4.77□□□□□ -1.65
CD44-221ENST00000526000 RPS10-NUDT3A0A1W2PQS6 291 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 PRSS29PA6NIE9 313 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 FAM25EA8MYX2 175 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 I3L2K1 104 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 GOSR2O14653 212 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 TSC22D2O75157 780 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 SCGB2A1O75556 95 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 GIG44P09565 113 aaPredicted RBP4.77□□□□□ -1.65
CD44-221ENST00000526000 GIPP09681 153 aaPredicted RBP4.77□□□□□ -1.65
CD44-221ENST00000526000 ZNF688P0C7X2 276 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 RRAS2P62070 204 aaPredicted RBP4.77□□□□□ -1.65
CD44-221ENST00000526000 RAB11AP62491 216 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 RELQ04864 619 aaPredicted RBP4.77□□□□□ -1.65
CD44-221ENST00000526000 FGL1Q08830 312 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 IL15RAQ13261 267 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 BSXQ3C1V8 233 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 ETFRF1Q6IPR1 90 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 STXBP6Q8NFX7 210 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 RNASEH2CQ8TDP1 164 aaKnown RBP4.77□□□□□ -1.65
CD44-221ENST00000526000 CHAC2Q8WUX2 184 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 SMIM8Q96KF7 97 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 OR10C1Q96KK4 312 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 MGAT4CQ9UBM8 478 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 CELA1Q9UNI1 258 aa4.77□□□□□ -1.65
CD44-221ENST00000526000 FRAS1Q86XX4 4008 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 AGRNO00468 2067 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 TRAV10A0A0B4J240 114 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 E5RGE8 158 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 L7N2F9 121 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 MBPP02686 304 aaPredicted RBP4.76□□□□□ -1.65
CD44-221ENST00000526000 NPY1RP25929 384 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 EMP1P54849 157 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 RAP2BP61225 183 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 VAMP2P63027 116 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 ACTL10Q5JWF8 245 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms