RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 SCGB1D1O95968 90 aa13.15□□□□□ -0.3
CCDC90B-203ENST00000525503 FRMD6-AS1P0C7T7 363 aa13.15□□□□□ -0.3
CCDC90B-203ENST00000525503 GP9P14770 177 aa13.15□□□□□ -0.3
CCDC90B-203ENST00000525503 RAB4BP61018 213 aa13.15□□□□□ -0.3
CCDC90B-203ENST00000525503 RASL11AQ6T310 242 aa13.15□□□□□ -0.3
CCDC90B-203ENST00000525503 REC114Q7Z4M0 266 aa13.15□□□□□ -0.3
CCDC90B-203ENST00000525503 LINC00469Q8N7U9 141 aa13.15□□□□□ -0.3
CCDC90B-203ENST00000525503 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
CCDC90B-203ENST00000525503 KLF12Q9Y4X4 402 aa13.15□□□□□ -0.3
CCDC90B-203ENST00000525503 LOC105371242A0A075B767 164 aa13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 SPINK4O60575 86 aa13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 IGLC1P0CG04 106 aa13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 ARF6P62330 175 aa13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 CDSNQ15517 529 aa13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 MMDQ15546 238 aa13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 C11orf71Q6IPW1 123 aa13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 ZNF664Q8N3J9 261 aa13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 WNT10AQ9GZT5 417 aa13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-203ENST00000525503 SERF1AO75920 110 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 HIST1H1EP10412 219 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 GNG5P63218 68 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 USF2Q15853 346 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 C5orf17Q8NAS9 161 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 MBD6Q96DN6 1003 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 C14orf144Q96I85 54 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 RASL11BQ9BPW5 248 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 ATG101Q9BSB4 218 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 SSBP3Q9BWW4 388 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 TLN1Q9Y490 2541 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 NBR2O15453 112 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 PSG1P11464 419 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 MRPL54Q6P161 138 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 NUDT10Q8NFP7 164 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 WIPF2Q8TF74 440 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 NUDT11Q96G61 164 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 FMC1Q96HJ9 113 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 TMEM14CQ9P0S9 112 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 NAGKQ9UJ70 344 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 PTPRQQ9UMZ3 2332 aa13.13□□□□□ -0.31
CCDC90B-203ENST00000525503 LY6HO94772 140 aa13.12□□□□□ -0.31
CCDC90B-203ENST00000525503 LINC00310P59036 64 aa13.12□□□□□ -0.31
CCDC90B-203ENST00000525503 LYZP61626 148 aa13.12□□□□□ -0.31
CCDC90B-203ENST00000525503 SLC35B1P78383 322 aa13.12□□□□□ -0.31
CCDC90B-203ENST00000525503 LDLRAD2Q5SZI1 272 aa13.12□□□□□ -0.31
CCDC90B-203ENST00000525503 NPBQ8NG41 125 aa13.12□□□□□ -0.31
CCDC90B-203ENST00000525503 GPR82Q96P67 336 aa13.12□□□□□ -0.31
CCDC90B-203ENST00000525503 SPTBN2O15020 2390 aa13.12□□□□□ -0.31
CCDC90B-203ENST00000525503 A8MWP6 167 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 TOMM40O96008 361 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 PRTN3P24158 256 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 CFHR4Q92496 578 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 FAM168AQ92567 244 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 GSX1Q9H4S2 264 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 HILPDAQ9Y5L2 63 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 NAV3Q8IVL0 2385 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 ODF3BA8MYP8 253 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 NDUFA3O95167 84 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 CA1P00915 261 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 APCSP02743 223 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 SNRPCP09234 159 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 ZNF600Q6ZNG1 722 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 TMEM68Q96MH6 324 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 SAMD10Q9BYL1 202 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 Q9H3A6 140 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 GNB4Q9HAV0 340 aa13.11□□□□□ -0.31
CCDC90B-203ENST00000525503 BRS3P32247 399 aa13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 GPR6P46095 362 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 PRR27Q6MZM9 219 aa13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 C1orf122Q6ZSJ8 110 aa13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 LHFPL4Q7Z7J7 247 aa13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 TSKUQ8WUA8 353 aa13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 RBM14Q96PK6 669 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 C7orf69Q9H7B7 122 aa13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 OTORQ9NRC9 128 aa13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 MALRD1Q5VYJ5 2156 aa13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 POLEQ07864 2286 aa13.1□□□□□ -0.31
CCDC90B-203ENST00000525503 LEMD1Q68G75 181 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 RPH3ALQ9UNE2 315 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 RNF24Q9Y225 148 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 DCHS1Q96JQ0 3298 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 K7EIM0 57 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 TCRAP04437 139 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 NHLH1Q02575 133 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 CCDC144NLQ6NUI1 221 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 Q6ZWC4 215 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 KIR3DL3Q8N743 410 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 SIGLECL1Q8N7X8 197 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 NUP35Q8NFH5 326 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 HSPB9Q9BQS6 159 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 MLST8Q9BVC4 326 aa13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 MRPL27Q9P0M9 148 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-203ENST00000525503 BMPR1BO00238 502 aa13.08□□□□□ -0.32
CCDC90B-203ENST00000525503 LTAP01374 205 aa13.08□□□□□ -0.32
CCDC90B-203ENST00000525503 IGKV1-17P01599 117 aa13.08□□□□□ -0.32
CCDC90B-203ENST00000525503 KLRD1Q13241 179 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms