RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 FAM208BQ5VWN6 2430 aa7.85□□□□□ -1.15
VPS13B-212ENST00000524330 USP9XQ93008 2570 aaPredicted RBP7.84□□□□□ -1.15
VPS13B-212ENST00000524330 A0A0G2JLM5 398 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 PSMB11A5LHX3 300 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 BMPR1BO00238 502 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 PPP1R2P9O14990 202 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 NDUFB8O95169 186 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 OR2C1O95371 312 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 S100A9P06702 114 aaKnown RBP7.84□□□□□ -1.15
VPS13B-212ENST00000524330 DEFB112Q30KQ8 113 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 ATRAIDQ6UW56 229 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 C15orf54Q8N8G6 183 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 PIFOQ8TCI5 191 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 RNF125Q96EQ8 232 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 BTF3L4Q96K17 158 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 SLC25A2Q9BXI2 301 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 SDF2L1Q9HCN8 221 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 RABAC1Q9UI14 185 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 DMRT1Q9Y5R6 373 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 EPG5Q9HCE0 2579 aa7.84□□□□□ -1.15
VPS13B-212ENST00000524330 ZFYVE26Q68DK2 2539 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 TRBV9A0A0B4J1U6 114 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 TMEM89A2RUT3 159 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 DNASE2O00115 360 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-212ENST00000524330 TSPAN4O14817 238 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 EIF3GO75821 320 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS13B-212ENST00000524330 AVPP01185 164 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 FSHBP01225 129 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 IGKV1-17P01599 117 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 TRGV3P03979 118 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 IL4P05112 153 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 HIST1H1EP10412 219 aaKnown RBP7.83□□□□□ -1.16
VPS13B-212ENST00000524330 S100PP25815 95 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 SRP14P37108 136 aaKnown RBP7.83□□□□□ -1.16
VPS13B-212ENST00000524330 ATP5G3P48201 142 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 CNN1P51911 297 aaKnown RBP7.83□□□□□ -1.16
VPS13B-212ENST00000524330 ADIRFQ15847 76 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 C15orf32Q32M92 178 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 PATE2Q6UY27 113 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 C19orf35Q6ZS72 473 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 HIST1H2BAQ96A08 127 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 C11orf52Q96A22 123 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 ANAPC16Q96DE5 110 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 OR5B12Q96R08 314 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 SHANK2-AS3Q9BTD1 123 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 C20orf24Q9BUV8 137 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 SLC25A39Q9BZJ4 359 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-212ENST00000524330 PRSS22Q9GZN4 317 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 NPFFR1Q9GZQ6 430 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 TMEM242Q9NWH2 141 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 MRPL27Q9P0M9 148 aaKnown RBP7.83□□□□□ -1.16
VPS13B-212ENST00000524330 VPREB3Q9UKI3 123 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 LY96Q9Y6Y9 160 aa7.83□□□□□ -1.16
VPS13B-212ENST00000524330 UBR5O95071 2799 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-212ENST00000524330 MDFIC2A0A1B0GVS7 189 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 WI2-2373I1.2A0A1W2PRP0 233 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 HELTA6NFD8 242 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 CLDN34H7C241 214 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 NDUFB4O95168 129 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 OR10J4P0C629 311 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 NBEAP1P0C6P0 100 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 RPL7P18124 248 aaKnown RBP7.82□□□□□ -1.16
VPS13B-212ENST00000524330 AKR1C3P42330 323 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 IER3P46695 156 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 SLC35B1P78383 322 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 RPL19P84098 196 aaKnown RBP7.82□□□□□ -1.16
VPS13B-212ENST00000524330 FBLN7Q53RD9 439 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 Q6YL49 198 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 TMEM86BQ8N661 226 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 MAPK1IP1LQ8NDC0 245 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 ZNF502Q8TBZ5 544 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 FAM167A-AS1Q96KT0 104 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 GPR82Q96P67 336 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 GNB4Q9HAV0 340 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 BIN3Q9NQY0 253 aa7.82□□□□□ -1.16
VPS13B-212ENST00000524330 YTHDF2Q9Y5A9 579 aaKnown RBP7.82□□□□□ -1.16
VPS13B-212ENST00000524330 TRAV5A0A0B4J249 113 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 OR2T8A6NH00 312 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 C9JCJ5 164 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 G3V318 75 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 H3BRN7 92 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 K7EQM0 130 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 TGOLN2O43493 480 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 CD99P14209 185 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 TPPP2P59282 170 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 TAS2R60P59551 318 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 SUMO1P63165 101 aaKnown RBP7.81□□□□□ -1.16
VPS13B-212ENST00000524330 TMEM88Q6PEY1 159 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 KCNIP4Q6PIL6 250 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 LYPD1Q8N2G4 141 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 ZNF491Q8N8L2 437 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 CMTM2Q8TAZ6 248 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 GSX1Q9H4S2 264 aaPredicted RBP7.81□□□□□ -1.16
VPS13B-212ENST00000524330 PLXNB1O43157 2135 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 LRBAP50851 2863 aa7.81□□□□□ -1.16
VPS13B-212ENST00000524330 SCO2A0A1W2PP80 73 aa7.8□□□□□ -1.16
VPS13B-212ENST00000524330 H7BYZ3 331 aa7.8□□□□□ -1.16
VPS13B-212ENST00000524330 AMY1AP04745 511 aa7.8□□□□□ -1.16
VPS13B-212ENST00000524330 SLC25A5P05141 298 aaKnown RBP7.8□□□□□ -1.16
VPS13B-212ENST00000524330 CLEC3BP05452 202 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms