RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 K7EPK0 472 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 SLC31A1O15431 190 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 PITX3O75364 302 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 DHRS3O75911 302 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 IFNA17P01571 189 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 MMP7P09237 267 aaPredicted RBP3.44□□□□□ -1.86
SKP1-213ENST00000524288 OR5AL1P0C617 328 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 CCL2P13500 99 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 ZNF14P17017 642 aaPredicted RBP3.44□□□□□ -1.86
SKP1-213ENST00000524288 ZNF93P35789 620 aaPredicted RBP3.44□□□□□ -1.86
SKP1-213ENST00000524288 CAPZBP47756 277 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 RAB2AP61019 212 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 PPP1CAP62136 330 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 MOBPQ13875 183 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 SLC9A3R2Q15599 337 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 NNATQ16517 81 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 HIST3H3Q16695 136 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 IAH1Q2TAA2 248 aaPredicted RBP3.44□□□□□ -1.86
SKP1-213ENST00000524288 COX19Q49B96 90 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 GLIPR1L1Q6UWM5 242 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 DPPA3Q6W0C5 159 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 MARCH3Q86UD3 253 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 TMEM105Q8N8V8 129 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 C11orf40Q8WZ69 217 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 CPNE2Q96FN4 548 aaPredicted RBP3.44□□□□□ -1.86
SKP1-213ENST00000524288 PECRQ9BY49 303 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 BCL2L14Q9BZR8 327 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 C19orf12Q9NSK7 152 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 C14orf166Q9Y224 244 aaKnown RBP3.44□□□□□ -1.86
SKP1-213ENST00000524288 LHFPL6Q9Y693 200 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 V9GYS6 101 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 KMT2EQ8IZD2 1858 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 IGKV1D-43A0A0B4J1Z2 117 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 TRAV1-1A0A0B4J248 108 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 IGKV1-9A0A0C4DH69 117 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 CENPVL3A0A0U1RRI6 287 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 LOC102725191A0A1B0GVB3 256 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 DUXBA0A1W2PPF3 345 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 B4DEV8 164 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 UMAD1C9J7I0 102 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 H3BSH0 61 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 M0R1B8 84 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 CDS2O95674 445 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 TNFP01375 233 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 IFNA21P01568 189 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 CD28P10747 220 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 HIST1H1BP16401 226 aaKnown RBP3.43□□□□□ -1.86
SKP1-213ENST00000524288 IL12BP29460 328 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 TMEM33P57088 247 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 S100A10P60903 97 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 RAB4BP61018 213 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 UBE2KP61086 200 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 GRB2P62993 217 aaKnown RBP3.43□□□□□ -1.86
SKP1-213ENST00000524288 HIST1H3AP68431 136 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 FMODQ06828 376 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 PLCXD2Q0VAA5 305 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 OR8B8Q15620 311 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 DEFB110Q30KQ9 67 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 TMEM176BQ3YBM2 270 aaPredicted RBP3.43□□□□□ -1.86
SKP1-213ENST00000524288 HIST2H3PS2Q5TEC6 136 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 Q6ZS49 121 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 SLC35E3Q7Z769 313 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 SGPP2Q8IWX5 399 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 TMEM156Q8N614 296 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 OR8B12Q8NGG6 310 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 PATE1Q8WXA2 126 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 PP6455Q8WZ26 134 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 ARHGAP5-AS1Q96IT6 56 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 IP6K3Q96PC2 410 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 GGACTQ9BVM4 153 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 ANGPTL4Q9BY76 406 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 TBL1XR1Q9BZK7 514 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 NAA60Q9H7X0 242 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 METTL8Q9H825 291 aaKnown RBP3.43□□□□□ -1.86
SKP1-213ENST00000524288 SPACA1Q9HBV2 294 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 OR2S2Q9NQN1 319 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 DKKL1Q9UK85 242 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 CENPFP49454 3210 aa3.43□□□□□ -1.86
SKP1-213ENST00000524288 MYO9BQ13459 2157 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 LOC102724200A0A096LPH7 203 aaPredicted RBP3.42□□□□□ -1.86
SKP1-213ENST00000524288 IGHV6-1A0A0B4J1U7 121 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 SPTY2D1-AS1A0A0U1RR47 76 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 K7EM74 188 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 NDUFS5O43920 106 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 CYB5R3P00387 301 aaPredicted RBP3.42□□□□□ -1.86
SKP1-213ENST00000524288 SRP19P09132 144 aaKnown RBP3.42□□□□□ -1.86
SKP1-213ENST00000524288 NQO2P16083 231 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 CBR1P16152 277 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 IL3RAP26951 378 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 PPP1CCP36873 323 aaKnown RBP3.42□□□□□ -1.86
SKP1-213ENST00000524288 RBP2P50120 134 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 PKIAP61925 76 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 LSM6P62312 80 aaKnown RBP3.42□□□□□ -1.86
SKP1-213ENST00000524288 BAXQ07812 192 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 PMVKQ15126 192 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 OR8G1Q15617 311 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 TTC32Q5I0X7 151 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 PYY3Q5JQD4 70 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 C10orf128Q5T292 105 aa3.42□□□□□ -1.86
SKP1-213ENST00000524288 ZNF101Q8IZC7 436 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms