RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ZFP92A6NM28 416 aa13.17□□□□□ -0.3
TRAPPC9-211ENST00000521700 LYRM1O43325 122 aa13.17□□□□□ -0.3
TRAPPC9-211ENST00000521700 RPP30P78346 268 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-211ENST00000521700 ZNF90Q03938 601 aa13.17□□□□□ -0.3
TRAPPC9-211ENST00000521700 OR51G1Q8NGK1 321 aa13.17□□□□□ -0.3
TRAPPC9-211ENST00000521700 RNF183Q96D59 192 aa13.17□□□□□ -0.3
TRAPPC9-211ENST00000521700 RYR3Q15413 4870 aa13.17□□□□□ -0.3
TRAPPC9-211ENST00000521700 HELTA6NFD8 242 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 PRSS46E5RG02 174 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 BUB3O43684 328 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 IFNA21P01568 189 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 POLR2GP62487 172 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 SPANXN5Q5MJ07 72 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 LEMD1Q68G75 181 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 OR4D5Q8NGN0 318 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 DCANP1Q8TF63 244 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 CSTL1Q9H114 145 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 C20orf85Q9H1P6 137 aa13.16□□□□□ -0.3
TRAPPC9-211ENST00000521700 STARD9Q9P2P6 4700 aa13.15□□□□□ -0.3
TRAPPC9-211ENST00000521700 A6NHS1 94 aa13.15□□□□□ -0.3
TRAPPC9-211ENST00000521700 H3BP45 60 aa13.15□□□□□ -0.3
TRAPPC9-211ENST00000521700 TCRBP04435 133 aa13.15□□□□□ -0.3
TRAPPC9-211ENST00000521700 LINC00299Q6ZSB3 139 aa13.15□□□□□ -0.3
TRAPPC9-211ENST00000521700 IL17DQ8TAD2 202 aa13.15□□□□□ -0.3
TRAPPC9-211ENST00000521700 MITD1Q8WV92 249 aa13.15□□□□□ -0.3
TRAPPC9-211ENST00000521700 RNF125Q96EQ8 232 aa13.15□□□□□ -0.3
TRAPPC9-211ENST00000521700 CCDC32Q9BV29 185 aa13.15□□□□□ -0.3
TRAPPC9-211ENST00000521700 IGKV1OR2-108A0A075B7D4 117 aa13.14□□□□□ -0.31
TRAPPC9-211ENST00000521700 NKX2-1P43699 371 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-211ENST00000521700 EIF2B2P49770 351 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-211ENST00000521700 AP2S1P53680 142 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-211ENST00000521700 THAP8Q8NA92 274 aa13.14□□□□□ -0.31
TRAPPC9-211ENST00000521700 TRGV9Q99603 122 aa13.14□□□□□ -0.31
TRAPPC9-211ENST00000521700 PBDC1Q9BVG4 233 aa13.14□□□□□ -0.31
TRAPPC9-211ENST00000521700 STRAPQ9Y3F4 350 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-211ENST00000521700 SNRPGP15A8MWD9 76 aa13.13□□□□□ -0.31
TRAPPC9-211ENST00000521700 ZNF688P0C7X2 276 aa13.13□□□□□ -0.31
TRAPPC9-211ENST00000521700 OR2F1Q13607 317 aa13.13□□□□□ -0.31
TRAPPC9-211ENST00000521700 PSENENQ9NZ42 101 aa13.13□□□□□ -0.31
TRAPPC9-211ENST00000521700 DYNC2H1Q8NCM8 4307 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-211ENST00000521700 TRAV6A0A075B6T7 132 aa13.12□□□□□ -0.31
TRAPPC9-211ENST00000521700 FABP1P07148 127 aa13.12□□□□□ -0.31
TRAPPC9-211ENST00000521700 PAX9P55771 341 aa13.12□□□□□ -0.31
TRAPPC9-211ENST00000521700 IAH1Q2TAA2 248 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-211ENST00000521700 OR8G2PQ6IF36 304 aa13.12□□□□□ -0.31
TRAPPC9-211ENST00000521700 SIGLEC15Q6ZMC9 328 aa13.12□□□□□ -0.31
TRAPPC9-211ENST00000521700 SMIM8Q96KF7 97 aa13.12□□□□□ -0.31
TRAPPC9-211ENST00000521700 AGRNO00468 2067 aa13.12□□□□□ -0.31
TRAPPC9-211ENST00000521700 A0A0J9YWU9 116 aa13.11□□□□□ -0.31
TRAPPC9-211ENST00000521700 SSSCA1O60232 199 aa13.11□□□□□ -0.31
TRAPPC9-211ENST00000521700 LYZP61626 148 aa13.11□□□□□ -0.31
TRAPPC9-211ENST00000521700 STHQ8IWL8 128 aa13.11□□□□□ -0.31
TRAPPC9-211ENST00000521700 ZBTB8BQ8NAP8 495 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC9-211ENST00000521700 S100ZQ8WXG8 99 aa13.11□□□□□ -0.31
TRAPPC9-211ENST00000521700 GSKIPQ9P0R6 139 aa13.11□□□□□ -0.31
TRAPPC9-211ENST00000521700 TENM2Q9NT68 2774 aa13.11□□□□□ -0.31
TRAPPC9-211ENST00000521700 KNCNA6PVL3 124 aa13.1□□□□□ -0.31
TRAPPC9-211ENST00000521700 PMS2P5A8MQ11 134 aa13.1□□□□□ -0.31
TRAPPC9-211ENST00000521700 SCGB1D2O95969 90 aa13.1□□□□□ -0.31
TRAPPC9-211ENST00000521700 EWSR1Q01844 656 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■■■□ 21.2
TRAPPC9-211ENST00000521700 ACOT7LQ6ZUV0 252 aa13.1□□□□□ -0.31
TRAPPC9-211ENST00000521700 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
TRAPPC9-211ENST00000521700 NRN1Q9NPD7 142 aa13.1□□□□□ -0.31
TRAPPC9-211ENST00000521700 NUDT15Q9NV35 164 aa13.1□□□□□ -0.31
TRAPPC9-211ENST00000521700 PFDN2Q9UHV9 154 aa13.1□□□□□ -0.31
TRAPPC9-211ENST00000521700 CA1P00915 261 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-211ENST00000521700 H2AFB2P0C5Z0 115 aa13.09□□□□□ -0.31
TRAPPC9-211ENST00000521700 NUP62P37198 522 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-211ENST00000521700 PSMG4Q5JS54 123 aa13.09□□□□□ -0.31
TRAPPC9-211ENST00000521700 TMEM182Q6ZP80 229 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-211ENST00000521700 TRPT1Q86TN4 253 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-211ENST00000521700 ZNF431Q8TF32 576 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-211ENST00000521700 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
TRAPPC9-211ENST00000521700 TBC1D24Q9ULP9 559 aa13.09□□□□□ -0.31
TRAPPC9-211ENST00000521700 FAM240BA0A1B0GVZ2 78 aa13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 CCSO14618 274 aa13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 CCNKO75909 580 aa13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 CFDP00746 253 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 GATA2P23769 480 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 AKR1C1Q04828 323 aa13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 TMEM14EPQ6UXP3 125 aa13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 TMEM144Q7Z5S9 345 aa13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 RAB40CQ96S21 281 aa13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 RCL1Q9Y2P8 373 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-211ENST00000521700 LCE6AA0A183 80 aa13.07□□□□□ -0.32
TRAPPC9-211ENST00000521700 MBPP02686 304 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-211ENST00000521700 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-211ENST00000521700 METTL15P1P0C7V9 234 aa13.07□□□□□ -0.32
TRAPPC9-211ENST00000521700 TAS2R30P59541 319 aa13.07□□□□□ -0.32
TRAPPC9-211ENST00000521700 C1orf194Q5T5A4 169 aa13.07□□□□□ -0.32
TRAPPC9-211ENST00000521700 PPP1R14BQ96C90 147 aa13.07□□□□□ -0.32
TRAPPC9-211ENST00000521700 RARRES2Q99969 163 aa13.07□□□□□ -0.32
TRAPPC9-211ENST00000521700 SMCO3A2RU48 225 aa13.06□□□□□ -0.32
TRAPPC9-211ENST00000521700 TSC22D2O75157 780 aa13.06□□□□□ -0.32
TRAPPC9-211ENST00000521700 SNRPD3P62318 126 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-211ENST00000521700 ASAH1Q13510 395 aa13.06□□□□□ -0.32
TRAPPC9-211ENST00000521700 MZT2BQ6NZ67 158 aa13.06□□□□□ -0.32
TRAPPC9-211ENST00000521700 C12orf45Q8N5I9 185 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms