RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 OR52E5Q8NH55 327 aa6.52□□□□□ -1.37
CDH17-204ENST00000520952 LINC00052Q96N35 136 aa6.52□□□□□ -1.37
CDH17-204ENST00000520952 NDUFAF3Q9BU61 184 aa6.52□□□□□ -1.37
CDH17-204ENST00000520952 WDR12Q9GZL7 423 aaKnown RBP6.52□□□□□ -1.37
CDH17-204ENST00000520952 TMEM222Q9H0R3 208 aa6.52□□□□□ -1.37
CDH17-204ENST00000520952 MIXL1Q9H2W2 232 aa6.52□□□□□ -1.37
CDH17-204ENST00000520952 NAA60Q9H7X0 242 aa6.52□□□□□ -1.37
CDH17-204ENST00000520952 VCX3AQ9NNX9 186 aa6.52□□□□□ -1.37
CDH17-204ENST00000520952 NRN1Q9NPD7 142 aa6.52□□□□□ -1.37
CDH17-204ENST00000520952 HSPG2P98160 4391 aa6.52□□□□□ -1.37
CDH17-204ENST00000520952 IGHV3OR16-12A0A075B7B8 117 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 SCGB2A1O75556 95 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 TOMM40O96008 361 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 P0DMU3 169 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 SLC25A4P12235 298 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 NPY1RP25929 384 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 EIF2B2P49770 351 aaKnown RBP6.51□□□□□ -1.37
CDH17-204ENST00000520952 SMCPP49901 116 aaPredicted RBP6.51□□□□□ -1.37
CDH17-204ENST00000520952 SNRPD3P62318 126 aaKnown RBP6.51□□□□□ -1.37
CDH17-204ENST00000520952 TMEM268Q5VZI3 342 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 SIGLEC15Q6ZMC9 328 aa6.51□□□□□ -1.37
CDH17-204ENST00000520952 ZNF705AQ6ZN79 300 aaPredicted RBP6.51□□□□□ -1.37
CDH17-204ENST00000520952 RNASEH2CQ8TDP1 164 aaKnown RBP6.51□□□□□ -1.37
CDH17-204ENST00000520952 RBPMSQ93062 196 aaKnown RBP6.51□□□□□ -1.37
CDH17-204ENST00000520952 ZNF705FA8MVS1 300 aaPredicted RBP6.5□□□□□ -1.37
CDH17-204ENST00000520952 CTDSP2O14595 271 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 TNFAIP8O95379 198 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 ZNF705DP0CH99 300 aaPredicted RBP6.5□□□□□ -1.37
CDH17-204ENST00000520952 ZNF705BP0CI00 300 aaPredicted RBP6.5□□□□□ -1.37
CDH17-204ENST00000520952 SPART-AS1P0CW21 52 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 MED14OSP0DP75 135 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 HLA-DRB4P13762 266 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 ZNF182P17025 639 aaPredicted RBP6.5□□□□□ -1.37
CDH17-204ENST00000520952 TBPP20226 339 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 TAS2R19P59542 299 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 NUTF2P61970 127 aaKnown RBP6.5□□□□□ -1.37
CDH17-204ENST00000520952 ZNF90Q03938 601 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 CTF1Q16619 201 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 FAM219AQ8IW50 185 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 PBDC1Q9BVG4 233 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 C1QTNF4Q9BXJ3 329 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 SEPSECSQ9HD40 501 aaKnown RBP6.5□□□□□ -1.37
CDH17-204ENST00000520952 GPR132Q9UNW8 380 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 C14orf166Q9Y224 244 aaKnown RBP6.5□□□□□ -1.37
CDH17-204ENST00000520952 HLA-DRB4X5D2U9 266 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
CDH17-204ENST00000520952 IGKV1D-37A0A075B6S9 117 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 CRYM-AS1A6NIL9 109 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 F6UB75 175 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 GABARAPH6UMI1 98 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 B3GALNT1O75752 331 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 GABARAPO95166 117 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 IFNA10P01566 189 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 PRM2P04554 102 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 HTN3P15516 51 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 NKX2-1P43699 371 aaPredicted RBP6.49□□□□□ -1.37
CDH17-204ENST00000520952 KLF9Q13886 244 aaPredicted RBP6.49□□□□□ -1.37
CDH17-204ENST00000520952 LGALS9BQ3B8N2 356 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 NMSQ5H8A3 153 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 FAM222AQ5U5X8 452 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 GPR107Q5VW38 600 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 ZNF709Q8N972 641 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 OR4B1Q8NGF8 309 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 AP3S1Q92572 193 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 RNF125Q96EQ8 232 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 NEU1Q99519 415 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 SLC35B3Q9H1N7 401 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 RBKSQ9H477 322 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 TMEM56-RWDD3S4R434 201 aa6.49□□□□□ -1.37
CDH17-204ENST00000520952 SOCS3O14543 225 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 SULT1A3P0DMM9 295 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 SULT1A4P0DMN0 295 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 OR2F1Q13607 317 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 GAMTQ14353 236 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 ETFRF1Q6IPR1 90 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 Q6ZR54 194 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 LYZL2Q7Z4W2 148 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 ZNF575Q86XF7 245 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 C1orf158Q8N1D5 194 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 OR51S1Q8NGJ8 323 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 OR4C16Q8NGL9 310 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 C20orf173Q96LM9 149 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 NIPSNAP3BQ9BS92 247 aa6.48□□□□□ -1.37
CDH17-204ENST00000520952 SAV1Q9H4B6 383 aaPredicted RBP6.48□□□□□ -1.37
CDH17-204ENST00000520952 NACAE9PAV3 2078 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 SMIM9A6NGZ8 99 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 ZFP92A6NM28 416 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 DISC1C4P0D8 188 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 RGS5O15539 181 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 GSTZ1O43708 216 aaPredicted RBP6.47□□□□□ -1.37
CDH17-204ENST00000520952 IFNA21P01568 189 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 SMIM18P0DKX4 95 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 LYZP61626 148 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 FAM78BQ5VT40 261 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 FOXI2Q6ZQN5 318 aa6.47□□□□□ -1.37
CDH17-204ENST00000520952 UBE2DNLQ8IWF7 75 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms