RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 U3KQ87 197 aa14.21□□□□□ -0.13
PABPC1-215ENST00000520804 PSG1P11464 419 aa14.2□□□□□ -0.14
PABPC1-215ENST00000520804 CCR6P51684 374 aa14.2□□□□□ -0.14
PABPC1-215ENST00000520804 SIGLEC15Q6ZMC9 328 aa14.2□□□□□ -0.14
PABPC1-215ENST00000520804 Q6ZTC4 211 aa14.2□□□□□ -0.14
PABPC1-215ENST00000520804 DTD1Q8TEA8 209 aa14.2□□□□□ -0.14
PABPC1-215ENST00000520804 RAB2BQ8WUD1 216 aa14.2□□□□□ -0.14
PABPC1-215ENST00000520804 TRAV10A0A0B4J240 114 aa14.19□□□□□ -0.14
PABPC1-215ENST00000520804 A0A0B4J2A0 478 aa14.19□□□□□ -0.14
PABPC1-215ENST00000520804 SUPT4H1P63272 117 aaKnown RBP14.19□□□□□ -0.14
PABPC1-215ENST00000520804 SMCO1Q147U7 214 aa14.19□□□□□ -0.14
PABPC1-215ENST00000520804 LYZL2Q7Z4W2 148 aa14.19□□□□□ -0.14
PABPC1-215ENST00000520804 LGI3Q8N145 548 aa14.19□□□□□ -0.14
PABPC1-215ENST00000520804 OR51G1Q8NGK1 321 aa14.19□□□□□ -0.14
PABPC1-215ENST00000520804 RBKSQ9H477 322 aa14.19□□□□□ -0.14
PABPC1-215ENST00000520804 RSL24D1Q9UHA3 163 aaKnown RBP14.19□□□□□ -0.14
PABPC1-215ENST00000520804 SHPKQ9UHJ6 478 aa14.19□□□□□ -0.14
PABPC1-215ENST00000520804 AKR1C4P17516 323 aa14.18□□□□□ -0.14
PABPC1-215ENST00000520804 NUTF2P61970 127 aaKnown RBP14.18□□□□□ -0.14
PABPC1-215ENST00000520804 KLF9Q13886 244 aaPredicted RBP14.18□□□□□ -0.14
PABPC1-215ENST00000520804 CENPSQ8N2Z9 138 aa14.18□□□□□ -0.14
PABPC1-215ENST00000520804 RNF125Q96EQ8 232 aa14.18□□□□□ -0.14
PABPC1-215ENST00000520804 C1QTNF4Q9BXJ3 329 aa14.18□□□□□ -0.14
PABPC1-215ENST00000520804 MCUBQ9NWR8 336 aa14.18□□□□□ -0.14
PABPC1-215ENST00000520804 H3BMM0 161 aa14.17□□□□□ -0.14
PABPC1-215ENST00000520804 TMBIM6P55061 237 aa14.17□□□□□ -0.14
PABPC1-215ENST00000520804 BCL7BQ9BQE9 202 aa14.17□□□□□ -0.14
PABPC1-215ENST00000520804 ANXA3P12429 323 aa14.16□□□□□ -0.14
PABPC1-215ENST00000520804 GPX4P36969 197 aaPredicted RBP14.16□□□□□ -0.14
PABPC1-215ENST00000520804 NUP62P37198 522 aaPredicted RBP14.16□□□□□ -0.14
PABPC1-215ENST00000520804 ATP5IP56385 69 aaPredicted RBP14.16□□□□□ -0.14
PABPC1-215ENST00000520804 SRPXP78539 464 aa14.16□□□□□ -0.14
PABPC1-215ENST00000520804 SOSTQ9BQB4 213 aa14.16□□□□□ -0.14
PABPC1-215ENST00000520804 XCL2Q9UBD3 114 aa14.16□□□□□ -0.14
PABPC1-215ENST00000520804 CELA1Q9UNI1 258 aa14.16□□□□□ -0.14
PABPC1-215ENST00000520804 IGHV4-4A0A075B6R2 117 aa14.15□□□□□ -0.14
PABPC1-215ENST00000520804 HLA-DRB4P13762 266 aa14.15□□□□□ -0.14
PABPC1-215ENST00000520804 NKX2-1P43699 371 aaPredicted RBP14.15□□□□□ -0.14
PABPC1-215ENST00000520804 GAMTQ14353 236 aa14.15□□□□□ -0.14
PABPC1-215ENST00000520804 C12orf74Q32Q52 190 aa14.15□□□□□ -0.14
PABPC1-215ENST00000520804 OR8G2PQ6IF36 304 aa14.15□□□□□ -0.14
PABPC1-215ENST00000520804 PBDC1Q9BVG4 233 aa14.15□□□□□ -0.14
PABPC1-215ENST00000520804 SLIRPQ9GZT3 109 aaKnown RBP14.15□□□□□ -0.14
PABPC1-215ENST00000520804 PFDN2Q9UHV9 154 aa14.15□□□□□ -0.14
PABPC1-215ENST00000520804 HLA-DRB4X5D2U9 266 aa14.15□□□□□ -0.14
PABPC1-215ENST00000520804 HERC2O95714 4834 aa14.15□□□□□ -0.15
PABPC1-215ENST00000520804 IGKV1D-37A0A075B6S9 117 aa14.14□□□□□ -0.15
PABPC1-215ENST00000520804 FABP12A6NFH5 140 aa14.14□□□□□ -0.15
PABPC1-215ENST00000520804 ZFP92A6NM28 416 aa14.14□□□□□ -0.15
PABPC1-215ENST00000520804 TNFSF8P32971 234 aa14.14□□□□□ -0.15
PABPC1-215ENST00000520804 ZNF90Q03938 601 aa14.14□□□□□ -0.15
PABPC1-215ENST00000520804 OR1S1Q8NH92 325 aa14.14□□□□□ -0.15
PABPC1-215ENST00000520804 SLC35E1Q96K37 410 aa14.14□□□□□ -0.15
PABPC1-215ENST00000520804 RNF126Q9BV68 326 aa14.14□□□□□ -0.15
PABPC1-215ENST00000520804 HECTD4Q9Y4D8 3996 aa14.13□□□□□ -0.15
PABPC1-215ENST00000520804 ZNF767PQ75MW2 155 aa14.13□□□□□ -0.15
PABPC1-215ENST00000520804 DEFB131BA0A096LNP1 70 aa14.12□□□□□ -0.15
PABPC1-215ENST00000520804 PIGBOS1A0A0B4J2F0 54 aa14.12□□□□□ -0.15
PABPC1-215ENST00000520804 PITX3O75364 302 aa14.12□□□□□ -0.15
PABPC1-215ENST00000520804 GDF5OSQ5U4N7 250 aa14.12□□□□□ -0.15
PABPC1-215ENST00000520804 ZNF705AQ6ZN79 300 aaPredicted RBP14.12□□□□□ -0.15
PABPC1-215ENST00000520804 WDR12Q9GZL7 423 aaKnown RBP14.12□□□□□ -0.15
PABPC1-215ENST00000520804 DUXBA0A1W2PPF3 345 aa14.11□□□□□ -0.15
PABPC1-215ENST00000520804 H3BMQ9 156 aa14.11□□□□□ -0.15
PABPC1-215ENST00000520804 AMBPP02760 352 aa14.11□□□□□ -0.15
PABPC1-215ENST00000520804 FABP1P07148 127 aa14.11□□□□□ -0.15
PABPC1-215ENST00000520804 DEFB1P60022 68 aa14.11□□□□□ -0.15
PABPC1-215ENST00000520804 C1orf194Q5T5A4 169 aa14.11□□□□□ -0.15
PABPC1-215ENST00000520804 LINC00052Q96N35 136 aa14.11□□□□□ -0.15
PABPC1-215ENST00000520804 NEU1Q99519 415 aa14.11□□□□□ -0.15
PABPC1-215ENST00000520804 SAV1Q9H4B6 383 aaPredicted RBP14.11□□□□□ -0.15
PABPC1-215ENST00000520804 SNRPGP15A8MWD9 76 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 SOCS3O14543 225 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 NOL3O60936 208 aaKnown RBP14.1□□□□□ -0.15
PABPC1-215ENST00000520804 IGKV3-20P01619 116 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 FAUP35544 74 aaKnown RBP14.1□□□□□ -0.15
PABPC1-215ENST00000520804 ID1P41134 155 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 PSMB3P49720 205 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 LYZP61626 148 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 RAB11AP62491 216 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 TMEM128Q5BJH2 165 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 FOXI2Q6ZQN5 318 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 TMED4Q7Z7H5 227 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 MCFD2Q8NI22 146 aa14.1□□□□□ -0.15
PABPC1-215ENST00000520804 ZNF705FA8MVS1 300 aaPredicted RBP14.09□□□□□ -0.15
PABPC1-215ENST00000520804 ZNF705DP0CH99 300 aaPredicted RBP14.09□□□□□ -0.15
PABPC1-215ENST00000520804 ZNF705BP0CI00 300 aaPredicted RBP14.09□□□□□ -0.15
PABPC1-215ENST00000520804 OR2F1Q13607 317 aa14.09□□□□□ -0.15
PABPC1-215ENST00000520804 LRTM2Q8N967 370 aa14.09□□□□□ -0.15
PABPC1-215ENST00000520804 TRIM63Q969Q1 353 aa14.09□□□□□ -0.15
PABPC1-215ENST00000520804 CLUHP3Q96NS8 147 aa14.09□□□□□ -0.15
PABPC1-215ENST00000520804 TRGV9Q99603 122 aa14.09□□□□□ -0.15
PABPC1-215ENST00000520804 SMIM9A6NGZ8 99 aa14.08□□□□□ -0.16
PABPC1-215ENST00000520804 IAPPP10997 89 aa14.08□□□□□ -0.16
PABPC1-215ENST00000520804 SLC25A6P12236 298 aa14.08□□□□□ -0.16
PABPC1-215ENST00000520804 FXYD7P58549 80 aa14.08□□□□□ -0.16
PABPC1-215ENST00000520804 THAP8Q8NA92 274 aa14.08□□□□□ -0.16
PABPC1-215ENST00000520804 COQ8AQ8NI60 647 aa14.08□□□□□ -0.16
PABPC1-215ENST00000520804 DNAH2Q9P225 4427 aa14.08□□□□□ -0.16
PABPC1-215ENST00000520804 IGKV1OR2-108A0A075B7D4 117 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms