RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 TMEM14AQ9Y6G1 99 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 PTPN13Q12923 2485 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 OBSL1O75147 1896 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 TRAV27A0A087WT01 109 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 BORCS7-ASMTA0A0B4J1R7 106 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 A0A1B0GX12 115 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 TMEM223A0PJW6 202 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 RBFOX3A6NFN3 312 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 ZNF860A6NHJ4 632 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 ZNF705GA8MUZ8 300 aaPredicted RBP4.68□□□□□ -1.66
LSM1-202ENST00000520286 CLDN34H7C241 214 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 SOCS1O15524 211 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 TCF21O43680 179 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 YPEL1O60688 119 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 NDUFB2O95178 105 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 CYB5R3P00387 301 aaPredicted RBP4.68□□□□□ -1.66
LSM1-202ENST00000520286 TRBV12-3P01733 135 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 MAS1P04201 325 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 CST2P09228 141 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 OR13C7P0DN81 318 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 LOXP28300 417 aaPredicted RBP4.68□□□□□ -1.66
LSM1-202ENST00000520286 TMEM33P57088 247 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 ZNF117Q03924 483 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 COL5A1-AS1Q5SY13 56 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 TMEM156Q8N614 296 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 APCDD1LQ8NCL9 501 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 OR10AC1Q8NH08 325 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 YPEL2Q96QA6 119 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 GGTLC1Q9BX51 225 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 AICDAQ9GZX7 198 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 TCEAL2Q9H3H9 227 aaPredicted RBP4.68□□□□□ -1.66
LSM1-202ENST00000520286 ZNF355PQ9NSJ1 428 aa4.68□□□□□ -1.66
LSM1-202ENST00000520286 PCDH15Q96QU1 1955 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 TEX15Q9BXT5 2789 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 SPAG17Q6Q759 2223 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 BPY2O14599 106 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 GEMIN2O14893 280 aaKnown RBP4.67□□□□□ -1.66
LSM1-202ENST00000520286 FOXH1O75593 365 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 IGLV3-19P01714 112 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 TYMSP04818 313 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 DBIP07108 87 aaKnown RBP4.67□□□□□ -1.66
LSM1-202ENST00000520286 IFI6P09912 130 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 AKR1C4P17516 323 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 OR10J1P30954 320 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 GALR1P47211 349 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 RANP62826 216 aaKnown RBP4.67□□□□□ -1.66
LSM1-202ENST00000520286 BTG2P78543 158 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 HLA-DRB3P79483 266 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 QRFPP83859 136 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 ZNF616Q08AN1 781 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 TNXAQ16473 311 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 TRMT12Q53H54 448 aaKnown RBP4.67□□□□□ -1.66
LSM1-202ENST00000520286 HES3Q5TGS1 186 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 SLC48A1Q6P1K1 146 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 Q6P435 159 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 DEGS2Q6QHC5 323 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 ZNF550Q7Z398 422 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 SMIM15Q7Z3B0 74 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 TRAPPC6BQ86SZ2 158 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 WDR86Q86TI4 376 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 ZNF615Q8N8J6 731 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 SLC26A10Q8NG04 563 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 OR4K13Q8NH42 304 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 MFSD8Q8NHS3 518 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 ZNF414Q96IQ9 312 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 KCNS1Q96KK3 526 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 IMMP2LQ96T52 175 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 AIF1LQ9BQI0 150 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 RTBDNQ9BSG5 229 aaPredicted RBP4.67□□□□□ -1.66
LSM1-202ENST00000520286 OR2J1Q9GZK6 312 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 C11orf1Q9H5F2 150 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 NAGKQ9UJ70 344 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 RAB22AQ9UL26 194 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 IER3IP1Q9Y5U9 82 aa4.67□□□□□ -1.66
LSM1-202ENST00000520286 ATG2BQ96BY7 2078 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 TRAV8-4A0A0B4J246 113 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 TRAV1-1A0A0B4J248 108 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 SNAI2O43623 268 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 RPP14O95059 124 aaKnown RBP4.66□□□□□ -1.66
LSM1-202ENST00000520286 P01737 135 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 PFN1P07737 140 aaKnown RBP4.66□□□□□ -1.66
LSM1-202ENST00000520286 OR5AL1P0C617 328 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 ALOX5APP20292 161 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 POLR2HP52434 150 aaKnown RBP4.66□□□□□ -1.66
LSM1-202ENST00000520286 CCL20P78556 96 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 ACTL10Q5JWF8 245 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 MRPL2Q5T653 305 aaKnown RBP4.66□□□□□ -1.66
LSM1-202ENST00000520286 DPPA3Q6W0C5 159 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 Q6ZR03 302 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 SSX7Q7RTT5 188 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 MDP1Q86V88 176 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 SAXO1Q8IYX7 474 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 CA13Q8N1Q1 262 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 ZNF676Q8N7Q3 588 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 OR2D3Q8NGH3 330 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 OR51A4Q8NGJ6 313 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 WFDC5Q8TCV5 224 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 SDF2Q99470 211 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 FKBP11Q9NYL4 201 aa4.66□□□□□ -1.66
LSM1-202ENST00000520286 FUT9Q9Y231 359 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms